Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0022

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
20,335	+				+0.6
20,336	-				-0.3
20,336	-				-0.3
20,344	+				+0.1
20,344	+				-0.2
20,345	-				+1.0
20,345	-				+1.1
20,345	-				-0.3
20,466	+				+0.7
20,466	+				-0.3
20,467	-				-0.3
20,522	+				+0.6
20,522	+				+1.1
20,553	+				-0.3
20,553	+				-0.6
20,553	+				+0.7
20,554	-				+1.1
20,554	-				-0.3
20,554	-				+0.8
20,554	-				-1.9
20,582	+				-1.3
20,583	-				+0.2
20,583	-				-0.3
20,583	-				-0.3
20,638	+				-0.3
20,638	+				-0.0
20,642	+				-0.3
20,643	-				+0.3
20,643	-				+1.4
20,741	+				+0.1
20,860	+				+0.8
20,861	-				-0.3
20,916	+				+0.2
20,916	+				+0.3
20,917	-				-0.3
20,955	+				+0.6
20,955	+				-0.3
20,956	-				+0.5
20,976	+				-0.1
20,990	+				-0.3
20,991	-				-0.3
21,051	-				-0.3
21,149	-		Rru_B0021	0.36	-0.3
21,488	-		Rru_B0022	0.43	-2.3
21,614	+		Rru_B0022	0.74	-0.9
21,614	+		Rru_B0022	0.74	-0.3
21,704	+				+0.1
21,704	+				+0.0
21,704	+				+1.0
21,704	+				+0.6
21,704	+				+0.6
21,705	-				+1.6
21,705	-				-0.3
21,705	-				-1.3
21,705	-				-0.3
21,705	-				-1.3
21,705	-				+1.1
21,705	-				-1.9
21,705	-				-0.3
21,811	+				+0.7
21,811	+				+0.8
21,811	+				-0.3
21,811	+				+0.7
21,811	+				-0.3
21,811	+				+0.5
21,811	+				-0.3
21,812	-				+0.4
21,812	-				+1.3
21,812	-				-1.9
21,812	-				+1.5
21,812	-				+1.5
21,812	-				+1.4
21,841	-				-0.3
21,841	-				+1.5
21,841	-				+1.2
22,060	-		Rru_B0023	0.33	+0.5
22,060	-		Rru_B0023	0.33	+0.5
22,074	+		Rru_B0023	0.36	-0.3
22,074	+		Rru_B0023	0.36	-0.3
22,075	-		Rru_B0023	0.36	+0.3
22,075	-		Rru_B0023	0.36	+1.0
22,075	-		Rru_B0023	0.36	+0.8
22,168	-		Rru_B0023	0.55	-0.3
22,168	-		Rru_B0023	0.55	+0.4
22,168	-		Rru_B0023	0.55	-0.3
22,183	-		Rru_B0023	0.58	-0.5
22,183	-		Rru_B0023	0.58	-0.3
22,369	+				-0.3
22,369	+				+0.5
22,369	+				+1.3
22,370	-				+0.7
22,370	-				-1.9
22,370	-				-0.3
22,370	-				+0.7
22,370	-				-0.3
22,370	-				-0.3
22,388	+				+0.4
22,388	+				-0.1
22,389	-				-0.3
22,389	-				+0.6
22,389	-				+0.3
22,543	-				+0.7
22,580	-				-0.3
22,675	+				-0.3
22,680	+				+0.2
22,681	-				-0.3
22,681	-				-0.3
22,701	+				+1.4
22,701	+				-1.3
22,701	+				-0.3
22,702	-				+0.1
22,717	+				-1.3