Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0010

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
11,854	+				+0.1
11,855	-				+1.0
11,855	-				-2.3
11,895	+				-0.3
11,896	-				-0.3
11,896	-				-1.9
11,896	-				+0.2
11,938	+				-1.3
11,947	+				-0.1
11,948	-				-1.9
11,980	+				-0.3
11,980	+				-0.3
11,980	+				-0.3
11,980	+				-0.3
12,009	+				+0.5
12,009	+				-0.6
12,009	+				-1.9
12,010	-				-1.3
12,010	-				-1.3
12,010	-				+0.9
12,010	-				-0.1
12,107	-				+0.3
12,107	-				-0.3
12,107	-				-1.3
12,107	-				+0.8
12,138	+				+0.2
12,139	-				+0.6
12,142	-				-0.3
12,155	-				-0.3
12,179	-				+1.6
12,194	+				-0.2
12,261	+				+1.2
12,262	-				+0.0
12,287	+				+0.8
12,298	-				-0.3
12,298	-				+0.2
12,300	+				+0.5
12,301	-				+0.3
12,301	-				+0.7
12,365	+				+0.7
12,365	+				+0.5
12,366	-				+1.2
12,406	-				-0.3
12,475	+				+0.5
12,475	+				-0.3
12,475	+				-0.3
12,475	+				+0.3
12,476	-				+1.5
12,476	-				+1.1
12,476	-				-0.3
12,481	-				+0.4
12,481	-				-0.3
12,510	+				-0.1
12,510	+				+0.5
12,511	-				-0.3
12,511	-				+1.0
12,511	-				+1.4
12,511	-				-0.3
12,517	+				+0.1
12,517	+				-0.3
12,517	+				-0.1
12,518	-				-1.9
12,554	-		Rru_B0010	0.13	+0.6
12,601	+		Rru_B0010	0.22	+1.1
12,671	-		Rru_B0010	0.34	-1.3
12,757	+		Rru_B0010	0.50	-0.7
12,757	+		Rru_B0010	0.50	-0.3
12,758	-		Rru_B0010	0.50	+0.3
12,881	+		Rru_B0010	0.72	-0.3
12,882	-		Rru_B0010	0.72	-0.3
12,882	-		Rru_B0010	0.72	-0.0
12,882	-		Rru_B0010	0.72	-0.9
12,882	-		Rru_B0010	0.72	-0.3
12,937	+		Rru_B0010	0.82	-0.1
13,164	+		Rru_B0011	0.38	-0.3
13,164	+		Rru_B0011	0.38	+0.4
13,164	+		Rru_B0011	0.38	+0.6
13,164	+		Rru_B0011	0.38	-1.3
13,165	-		Rru_B0011	0.39	+1.1
13,183	+		Rru_B0011	0.45	+1.3
13,184	-		Rru_B0011	0.45	+1.9
13,184	-		Rru_B0011	0.45	+0.8
13,242	+		Rru_B0011	0.64	-1.3
13,243	-		Rru_B0011	0.65	-1.3
13,288	+		Rru_B0011	0.80	-0.3
13,288	+		Rru_B0011	0.80	-1.3
13,288	+		Rru_B0011	0.80	-0.2
13,288	+		Rru_B0011	0.80	+0.2
13,288	+		Rru_B0011	0.80	-0.3
13,288	+		Rru_B0011	0.80	+0.3
13,289	-		Rru_B0011	0.80	+0.4
13,289	-		Rru_B0011	0.80	+0.2
13,289	-		Rru_B0011	0.80	+0.6
13,292	-		Rru_B0011	0.81	-0.3
13,292	-		Rru_B0011	0.81	-0.2
13,292	-		Rru_B0011	0.81	+0.7
13,292	-		Rru_B0011	0.81	+0.6
13,338	-				+0.7
13,392	+				-0.3
13,392	+				-0.3
13,392	+				-0.3
13,393	-				+0.2
13,412	+				+1.0
13,412	+				-0.3
13,412	+				+0.0
13,412	+				+0.3
13,412	+				-0.5
13,413	-				-0.3
13,413	-				-0.3
13,413	-				-2.3
13,413	-				-0.3
13,413	-				+0.8
13,540	+		Rru_B0012	0.49	+0.3
13,540	+		Rru_B0012	0.49	-1.3
13,540	+		Rru_B0012	0.49	-0.3
13,540	+		Rru_B0012	0.49	-0.4
13,540	+		Rru_B0012	0.49	-0.3
13,540	+		Rru_B0012	0.49	-0.3
13,540	+		Rru_B0012	0.49	+0.4
13,541	-		Rru_B0012	0.49	+1.1
13,541	-		Rru_B0012	0.49	-1.3
13,541	-		Rru_B0012	0.49	-0.3
13,541	-		Rru_B0012	0.49	+0.1
13,541	-		Rru_B0012	0.49	-0.0
13,541	-		Rru_B0012	0.49	+0.7
13,541	-		Rru_B0012	0.49	+0.0
13,647	-		Rru_B0012	0.89	+0.1
13,687	+				-0.3
13,687	+				-0.3
13,688	-				+0.6
13,688	-				-0.3
13,688	-				-0.1
13,688	-				-0.3
13,688	-				-0.3
13,688	-				+0.8
13,688	-				+0.9
13,688	-				-1.3
13,688	-				-0.3
13,714	-				-0.3
13,735	-				-1.3
13,735	-				+0.6
13,763	+				-0.1
13,763	+				+0.5
13,764	-				-0.2
13,764	-				+1.2
13,848	+				+0.0