Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20305 and BWI76_RS20310 are separated by 3 nucleotides BWI76_RS20310 and BWI76_RS20315 are separated by 56 nucleotides BWI76_RS20315 and BWI76_RS20320 are separated by 41 nucleotides BWI76_RS20320 and BWI76_RS20325 are separated by 7 nucleotides
BWI76_RS20305: BWI76_RS20305 - hypothetical protein, at 4,253,352 to 4,253,606
_RS20305
BWI76_RS20310: BWI76_RS20310 - hypothetical protein, at 4,253,610 to 4,254,176
_RS20310
BWI76_RS20315: BWI76_RS20315 - N-acetyltransferase, at 4,254,233 to 4,254,730
_RS20315
BWI76_RS20320: BWI76_RS20320 - histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP, at 4,254,772 to 4,255,545
_RS20320
BWI76_RS20325: BWI76_RS20325 - histidine/lysine/arginine/ornithine ABC transporter permease HisM, at 4,255,553 to 4,256,269
_RS20325
Position (kb) 4254
4255 Strain fitness (log2 ratio) -1
0
1 at 4253.258 kb on + strand at 4253.270 kb on + strand at 4253.270 kb on + strand at 4253.270 kb on + strand at 4253.333 kb on + strand at 4253.641 kb on - strand at 4254.107 kb on + strand, within BWI76_RS20310 at 4254.107 kb on - strand, within BWI76_RS20310 at 4254.115 kb on - strand, within BWI76_RS20310 at 4254.122 kb on + strand at 4254.354 kb on + strand, within BWI76_RS20315 at 4254.505 kb on - strand, within BWI76_RS20315 at 4254.561 kb on + strand, within BWI76_RS20315 at 4254.777 kb on - strand at 4255.231 kb on + strand, within BWI76_RS20320 at 4255.312 kb on - strand, within BWI76_RS20320 at 4255.478 kb on + strand at 4255.486 kb on - strand at 4255.487 kb on + strand at 4255.505 kb on + strand at 4255.507 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 4,253,258 + +0.0 4,253,270 + +0.8 4,253,270 + -0.3 4,253,270 + +0.2 4,253,333 + -0.6 4,253,641 - -0.1 4,254,107 + BWI76_RS20310 0.88 +0.1 4,254,107 - BWI76_RS20310 0.88 +0.0 4,254,115 - BWI76_RS20310 0.89 +1.2 4,254,122 + -0.1 4,254,354 + BWI76_RS20315 0.24 +0.2 4,254,505 - BWI76_RS20315 0.55 +0.1 4,254,561 + BWI76_RS20315 0.66 +1.1 4,254,777 - -0.2 4,255,231 + BWI76_RS20320 0.59 +0.1 4,255,312 - BWI76_RS20320 0.70 -0.8 4,255,478 + -0.8 4,255,486 - +0.0 4,255,487 + -0.7 4,255,505 + +0.1 4,255,507 - +0.5
Or see this region's nucleotide sequence