Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03615 and BWI76_RS03620 are separated by 17 nucleotides BWI76_RS03620 and BWI76_RS03625 are separated by 147 nucleotides BWI76_RS03625 and BWI76_RS03630 are separated by 87 nucleotides BWI76_RS03630 and BWI76_RS03635 overlap by 7 nucleotides
BWI76_RS03615: BWI76_RS03615 - putative transcriptional regulatory protein, at 747,759 to 748,559
_RS03615
BWI76_RS03620: BWI76_RS03620 - TetR family transcriptional regulator, at 748,577 to 749,161
_RS03620
BWI76_RS03625: BWI76_RS03625 - NAD(P)H quinone oxidoreductase, at 749,309 to 750,091
_RS03625
BWI76_RS03630: BWI76_RS03630 - LysR family transcriptional regulator, at 750,179 to 751,087
_RS03630
BWI76_RS03635: BWI76_RS03635 - FosA family fosfomycin resistance glutathione transferase, at 751,081 to 751,524
_RS03635
Position (kb) 749
750
751 Strain fitness (log2 ratio) -1
0
1
2
3 at 748.369 kb on + strand, within BWI76_RS03615 at 748.574 kb on + strand at 748.728 kb on + strand, within BWI76_RS03620 at 748.814 kb on - strand, within BWI76_RS03620 at 748.823 kb on + strand, within BWI76_RS03620 at 748.823 kb on + strand, within BWI76_RS03620 at 748.859 kb on + strand, within BWI76_RS03620 at 748.867 kb on - strand, within BWI76_RS03620 at 749.145 kb on - strand at 749.219 kb on - strand at 749.320 kb on - strand at 749.376 kb on - strand at 749.381 kb on + strand at 749.483 kb on - strand, within BWI76_RS03625 at 749.530 kb on + strand, within BWI76_RS03625 at 749.538 kb on - strand, within BWI76_RS03625 at 749.568 kb on + strand, within BWI76_RS03625 at 749.610 kb on + strand at 749.739 kb on + strand, within BWI76_RS03625 at 749.739 kb on + strand, within BWI76_RS03625 at 749.754 kb on + strand, within BWI76_RS03625 at 749.757 kb on - strand, within BWI76_RS03625 at 749.970 kb on + strand, within BWI76_RS03625 at 749.978 kb on - strand, within BWI76_RS03625 at 749.984 kb on + strand, within BWI76_RS03625 at 750.123 kb on + strand at 750.263 kb on - strand at 750.294 kb on + strand, within BWI76_RS03630 at 750.475 kb on - strand, within BWI76_RS03630 at 750.534 kb on - strand, within BWI76_RS03630 at 750.548 kb on + strand, within BWI76_RS03630 at 750.734 kb on + strand, within BWI76_RS03630 at 750.734 kb on + strand, within BWI76_RS03630 at 750.751 kb on + strand, within BWI76_RS03630 at 750.880 kb on + strand, within BWI76_RS03630 at 750.948 kb on + strand, within BWI76_RS03630 at 751.005 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 748,369 + BWI76_RS03615 0.76 +0.1 748,574 + -0.1 748,728 + BWI76_RS03620 0.26 +0.7 748,814 - BWI76_RS03620 0.41 -0.4 748,823 + BWI76_RS03620 0.42 -0.4 748,823 + BWI76_RS03620 0.42 +0.1 748,859 + BWI76_RS03620 0.48 -0.6 748,867 - BWI76_RS03620 0.50 +0.2 749,145 - +0.5 749,219 - -0.9 749,320 - -0.2 749,376 - -0.8 749,381 + +2.9 749,483 - BWI76_RS03625 0.22 +1.4 749,530 + BWI76_RS03625 0.28 +0.2 749,538 - BWI76_RS03625 0.29 +0.1 749,568 + BWI76_RS03625 0.33 -0.2 749,610 + -0.9 749,739 + BWI76_RS03625 0.55 +0.5 749,739 + BWI76_RS03625 0.55 -0.9 749,754 + BWI76_RS03625 0.57 +0.9 749,757 - BWI76_RS03625 0.57 +1.6 749,970 + BWI76_RS03625 0.84 +1.2 749,978 - BWI76_RS03625 0.85 +0.4 749,984 + BWI76_RS03625 0.86 +1.4 750,123 + +0.3 750,263 - -0.1 750,294 + BWI76_RS03630 0.13 -0.0 750,475 - BWI76_RS03630 0.33 +0.0 750,534 - BWI76_RS03630 0.39 -0.2 750,548 + BWI76_RS03630 0.41 +0.2 750,734 + BWI76_RS03630 0.61 +0.7 750,734 + BWI76_RS03630 0.61 -1.2 750,751 + BWI76_RS03630 0.63 +0.7 750,880 + BWI76_RS03630 0.77 +2.3 750,948 + BWI76_RS03630 0.85 +0.3 751,005 + -0.4
Or see this region's nucleotide sequence