Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26570 and BWI76_RS26575 are separated by 68 nucleotides BWI76_RS26575 and BWI76_RS26580 are separated by 380 nucleotides
BWI76_RS26570: BWI76_RS26570 - anion permease, at 5,500,102 to 5,501,598
_RS26570
BWI76_RS26575: BWI76_RS26575 - universal stress protein B, at 5,501,667 to 5,502,002
_RS26575
BWI76_RS26580: BWI76_RS26580 - universal stress protein A, at 5,502,383 to 5,502,820
_RS26580
Position (kb) 5501
5502
5503 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5500.804 kb on + strand, within BWI76_RS26570 at 5500.822 kb on - strand, within BWI76_RS26570 at 5500.844 kb on + strand, within BWI76_RS26570 at 5501.354 kb on + strand, within BWI76_RS26570 at 5501.362 kb on - strand, within BWI76_RS26570 at 5501.372 kb on - strand, within BWI76_RS26570 at 5501.579 kb on - strand at 5501.796 kb on - strand, within BWI76_RS26575 at 5501.796 kb on - strand, within BWI76_RS26575 at 5501.808 kb on - strand, within BWI76_RS26575 at 5501.814 kb on - strand, within BWI76_RS26575 at 5501.826 kb on - strand, within BWI76_RS26575 at 5501.974 kb on + strand at 5501.974 kb on + strand at 5501.974 kb on + strand at 5501.982 kb on - strand at 5501.982 kb on - strand at 5502.005 kb on - strand at 5502.043 kb on - strand at 5502.077 kb on + strand at 5502.077 kb on + strand at 5502.085 kb on - strand at 5502.090 kb on + strand at 5502.161 kb on + strand at 5502.161 kb on + strand at 5502.283 kb on + strand at 5502.283 kb on + strand at 5502.291 kb on - strand at 5502.291 kb on - strand at 5502.344 kb on + strand at 5502.352 kb on - strand at 5502.381 kb on - strand at 5502.381 kb on - strand at 5502.381 kb on - strand at 5502.408 kb on + strand at 5502.408 kb on + strand at 5502.416 kb on - strand at 5502.416 kb on - strand at 5502.416 kb on - strand at 5502.469 kb on + strand, within BWI76_RS26580 at 5502.482 kb on - strand, within BWI76_RS26580 at 5502.485 kb on + strand, within BWI76_RS26580 at 5502.508 kb on - strand, within BWI76_RS26580 at 5502.515 kb on + strand, within BWI76_RS26580 at 5502.609 kb on - strand, within BWI76_RS26580 at 5502.627 kb on + strand, within BWI76_RS26580 at 5502.703 kb on - strand, within BWI76_RS26580 at 5502.739 kb on + strand, within BWI76_RS26580 at 5502.760 kb on + strand, within BWI76_RS26580 at 5502.770 kb on + strand, within BWI76_RS26580 at 5502.928 kb on + strand at 5502.946 kb on - strand at 5502.985 kb on + strand at 5502.993 kb on + strand at 5503.001 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 5,500,804 + BWI76_RS26570 0.47 -2.1 5,500,822 - BWI76_RS26570 0.48 -0.3 5,500,844 + BWI76_RS26570 0.50 -1.2 5,501,354 + BWI76_RS26570 0.84 -0.1 5,501,362 - BWI76_RS26570 0.84 -1.8 5,501,372 - BWI76_RS26570 0.85 +0.6 5,501,579 - -1.8 5,501,796 - BWI76_RS26575 0.38 -1.6 5,501,796 - BWI76_RS26575 0.38 -0.6 5,501,808 - BWI76_RS26575 0.42 -2.4 5,501,814 - BWI76_RS26575 0.44 -0.4 5,501,826 - BWI76_RS26575 0.47 -0.6 5,501,974 + -0.1 5,501,974 + +0.7 5,501,974 + -1.5 5,501,982 - +0.3 5,501,982 - +0.7 5,502,005 - +0.8 5,502,043 - +0.6 5,502,077 + -1.8 5,502,077 + -2.0 5,502,085 - +1.3 5,502,090 + +0.4 5,502,161 + -1.0 5,502,161 + -0.1 5,502,283 + -0.9 5,502,283 + -0.2 5,502,291 - +0.1 5,502,291 - +1.4 5,502,344 + -1.4 5,502,352 - +1.0 5,502,381 - -2.0 5,502,381 - -1.3 5,502,381 - +1.2 5,502,408 + +0.9 5,502,408 + -0.4 5,502,416 - +0.4 5,502,416 - +2.4 5,502,416 - +1.1 5,502,469 + BWI76_RS26580 0.20 +1.6 5,502,482 - BWI76_RS26580 0.23 +0.2 5,502,485 + BWI76_RS26580 0.23 +2.4 5,502,508 - BWI76_RS26580 0.29 -1.7 5,502,515 + BWI76_RS26580 0.30 -0.3 5,502,609 - BWI76_RS26580 0.52 -0.6 5,502,627 + BWI76_RS26580 0.56 -0.6 5,502,703 - BWI76_RS26580 0.73 -3.0 5,502,739 + BWI76_RS26580 0.81 -3.8 5,502,760 + BWI76_RS26580 0.86 +0.3 5,502,770 + BWI76_RS26580 0.88 +0.1 5,502,928 + +2.6 5,502,946 - +1.6 5,502,985 + -3.6 5,502,993 + +1.3 5,503,001 - +0.5
Or see this region's nucleotide sequence