Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25900 and BWI76_RS25905 overlap by 1 nucleotides BWI76_RS25905 and BWI76_RS25910 are separated by 166 nucleotides BWI76_RS25910 and BWI76_RS25915 are separated by 222 nucleotides BWI76_RS25915 and BWI76_RS25920 are separated by 59 nucleotides
BWI76_RS25900: BWI76_RS25900 - sulfurtransferase TusD, at 5,356,853 to 5,357,239
_RS25900
BWI76_RS25905: BWI76_RS25905 - hypothetical protein, at 5,357,239 to 5,357,961
_RS25905
BWI76_RS25910: BWI76_RS25910 - peptidyl-prolyl cis-trans isomerase, at 5,358,128 to 5,358,946
_RS25910
BWI76_RS25915: BWI76_RS25915 - protein SlyX, at 5,359,169 to 5,359,387
_RS25915
BWI76_RS25920: BWI76_RS25920 - peptidylprolyl isomerase, at 5,359,447 to 5,360,034
_RS25920
Position (kb) 5358
5359 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5357.275 kb on - strand at 5357.869 kb on - strand, within BWI76_RS25905 at 5358.166 kb on - strand at 5358.387 kb on + strand, within BWI76_RS25910 at 5358.434 kb on - strand, within BWI76_RS25910 at 5358.507 kb on + strand, within BWI76_RS25910 at 5358.607 kb on - strand, within BWI76_RS25910 at 5358.886 kb on - strand at 5358.953 kb on + strand at 5358.982 kb on - strand at 5359.006 kb on + strand at 5359.014 kb on - strand at 5359.052 kb on - strand at 5359.100 kb on + strand at 5359.146 kb on + strand at 5359.154 kb on - strand at 5359.154 kb on - strand at 5359.154 kb on - strand at 5359.194 kb on + strand, within BWI76_RS25915 at 5359.210 kb on - strand, within BWI76_RS25915 at 5359.329 kb on + strand, within BWI76_RS25915 at 5359.521 kb on - strand, within BWI76_RS25920 at 5359.585 kb on + strand, within BWI76_RS25920 at 5359.835 kb on - strand, within BWI76_RS25920
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 5,357,275 - -0.1 5,357,869 - BWI76_RS25905 0.87 -0.1 5,358,166 - -0.9 5,358,387 + BWI76_RS25910 0.32 -0.0 5,358,434 - BWI76_RS25910 0.37 -2.4 5,358,507 + BWI76_RS25910 0.46 -0.6 5,358,607 - BWI76_RS25910 0.58 -1.4 5,358,886 - -3.3 5,358,953 + -0.9 5,358,982 - -1.4 5,359,006 + +1.4 5,359,014 - +0.4 5,359,052 - +0.3 5,359,100 + -0.0 5,359,146 + -0.6 5,359,154 - -1.0 5,359,154 - -0.0 5,359,154 - +1.6 5,359,194 + BWI76_RS25915 0.11 -3.1 5,359,210 - BWI76_RS25915 0.19 +0.9 5,359,329 + BWI76_RS25915 0.73 +0.1 5,359,521 - BWI76_RS25920 0.13 +0.8 5,359,585 + BWI76_RS25920 0.23 -2.3 5,359,835 - BWI76_RS25920 0.66 +0.7
Or see this region's nucleotide sequence