Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22380 and BWI76_RS22385 are separated by 54 nucleotides BWI76_RS22385 and BWI76_RS22390 are separated by 12 nucleotides
BWI76_RS22380: BWI76_RS22380 - 6-phospho-beta-glucosidase, at 4,665,180 to 4,666,580
_RS22380
BWI76_RS22385: BWI76_RS22385 - beta-1,4 mannanase, at 4,666,635 to 4,668,830
_RS22385
BWI76_RS22390: BWI76_RS22390 - maltoporin, at 4,668,843 to 4,670,186
_RS22390
Position (kb)
4666
4667
4668
4669 Strain fitness (log2 ratio)
-2
-1
0
1 at 4665.762 kb on + strand, within BWI76_RS22380 at 4665.967 kb on + strand, within BWI76_RS22380 at 4665.975 kb on - strand, within BWI76_RS22380 at 4665.975 kb on - strand, within BWI76_RS22380 at 4666.507 kb on - strand at 4667.091 kb on - strand, within BWI76_RS22385 at 4667.091 kb on - strand, within BWI76_RS22385 at 4667.269 kb on + strand, within BWI76_RS22385 at 4667.660 kb on + strand, within BWI76_RS22385 at 4667.714 kb on - strand, within BWI76_RS22385 at 4667.950 kb on + strand, within BWI76_RS22385 at 4668.212 kb on - strand, within BWI76_RS22385 at 4668.212 kb on - strand, within BWI76_RS22385 at 4668.241 kb on - strand, within BWI76_RS22385 at 4668.241 kb on - strand, within BWI76_RS22385 at 4668.545 kb on - strand, within BWI76_RS22385 at 4668.667 kb on - strand at 4668.692 kb on - strand at 4669.043 kb on - strand, within BWI76_RS22390 at 4669.323 kb on + strand, within BWI76_RS22390 at 4669.331 kb on - strand, within BWI76_RS22390 at 4669.340 kb on + strand, within BWI76_RS22390 at 4669.341 kb on - strand, within BWI76_RS22390 at 4669.540 kb on - strand, within BWI76_RS22390 at 4669.546 kb on - strand, within BWI76_RS22390 at 4669.587 kb on + strand, within BWI76_RS22390 at 4669.751 kb on + strand, within BWI76_RS22390 at 4669.756 kb on - strand, within BWI76_RS22390
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 4,665,762 + BWI76_RS22380 0.42 -0.7 4,665,967 + BWI76_RS22380 0.56 +1.0 4,665,975 - BWI76_RS22380 0.57 -0.2 4,665,975 - BWI76_RS22380 0.57 +0.4 4,666,507 - +0.6 4,667,091 - BWI76_RS22385 0.21 +0.0 4,667,091 - BWI76_RS22385 0.21 -2.1 4,667,269 + BWI76_RS22385 0.29 +0.2 4,667,660 + BWI76_RS22385 0.47 +1.0 4,667,714 - BWI76_RS22385 0.49 +0.9 4,667,950 + BWI76_RS22385 0.60 -0.2 4,668,212 - BWI76_RS22385 0.72 +0.6 4,668,212 - BWI76_RS22385 0.72 +0.7 4,668,241 - BWI76_RS22385 0.73 +0.3 4,668,241 - BWI76_RS22385 0.73 -0.8 4,668,545 - BWI76_RS22385 0.87 -1.0 4,668,667 - -0.5 4,668,692 - -0.3 4,669,043 - BWI76_RS22390 0.15 +0.0 4,669,323 + BWI76_RS22390 0.36 -2.3 4,669,331 - BWI76_RS22390 0.36 +0.5 4,669,340 + BWI76_RS22390 0.37 -2.0 4,669,341 - BWI76_RS22390 0.37 +0.4 4,669,540 - BWI76_RS22390 0.52 -0.3 4,669,546 - BWI76_RS22390 0.52 -0.4 4,669,587 + BWI76_RS22390 0.55 +1.1 4,669,751 + BWI76_RS22390 0.68 -0.2 4,669,756 - BWI76_RS22390 0.68 +0.3
Or see this region's nucleotide sequence