Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18785 and BWI76_RS18790 are separated by 104 nucleotides BWI76_RS18790 and BWI76_RS18795 are separated by 42 nucleotides BWI76_RS18795 and BWI76_RS18800 are separated by 1 nucleotides BWI76_RS18800 and BWI76_RS18805 are separated by 7 nucleotides
BWI76_RS18785: BWI76_RS18785 - exodeoxyribonuclease I, at 3,893,282 to 3,894,706
_RS18785
BWI76_RS18790: BWI76_RS18790 - elongation factor G, at 3,894,811 to 3,896,913
_RS18790
BWI76_RS18795: BWI76_RS18795 - hypothetical protein, at 3,896,956 to 3,897,150
_RS18795
BWI76_RS18800: BWI76_RS18800 - transcriptional regulator, at 3,897,152 to 3,897,463
_RS18800
BWI76_RS18805: BWI76_RS18805 - pyruvate:ferredoxin (flavodoxin) oxidoreductase, at 3,897,471 to 3,900,986
_RS18805
Position (kb)
3894
3895
3896
3897 Strain fitness (log2 ratio)
-2
-1
0
1 at 3894.055 kb on + strand, within BWI76_RS18785 at 3894.063 kb on - strand, within BWI76_RS18785 at 3894.553 kb on + strand, within BWI76_RS18785 at 3894.667 kb on + strand at 3894.667 kb on + strand at 3894.796 kb on - strand at 3894.911 kb on + strand at 3895.005 kb on - strand at 3895.166 kb on - strand, within BWI76_RS18790 at 3895.274 kb on + strand, within BWI76_RS18790 at 3895.358 kb on - strand, within BWI76_RS18790 at 3895.365 kb on + strand, within BWI76_RS18790 at 3895.572 kb on - strand, within BWI76_RS18790 at 3895.739 kb on - strand at 3895.911 kb on + strand, within BWI76_RS18790 at 3895.939 kb on - strand, within BWI76_RS18790 at 3896.002 kb on + strand, within BWI76_RS18790 at 3896.273 kb on + strand, within BWI76_RS18790 at 3896.311 kb on - strand, within BWI76_RS18790 at 3896.380 kb on + strand, within BWI76_RS18790 at 3896.648 kb on - strand, within BWI76_RS18790 at 3896.658 kb on + strand, within BWI76_RS18790 at 3897.135 kb on - strand at 3897.268 kb on + strand, within BWI76_RS18800
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 3,894,055 + BWI76_RS18785 0.54 +0.1 3,894,063 - BWI76_RS18785 0.55 +0.1 3,894,553 + BWI76_RS18785 0.89 +0.0 3,894,667 + +0.8 3,894,667 + +0.4 3,894,796 - +1.6 3,894,911 + +1.4 3,895,005 - -0.1 3,895,166 - BWI76_RS18790 0.17 -1.1 3,895,274 + BWI76_RS18790 0.22 +0.7 3,895,358 - BWI76_RS18790 0.26 +0.6 3,895,365 + BWI76_RS18790 0.26 -0.4 3,895,572 - BWI76_RS18790 0.36 -0.5 3,895,739 - -1.1 3,895,911 + BWI76_RS18790 0.52 -1.8 3,895,939 - BWI76_RS18790 0.54 -1.1 3,896,002 + BWI76_RS18790 0.57 +0.7 3,896,273 + BWI76_RS18790 0.70 +0.7 3,896,311 - BWI76_RS18790 0.71 +0.4 3,896,380 + BWI76_RS18790 0.75 +0.3 3,896,648 - BWI76_RS18790 0.87 -1.0 3,896,658 + BWI76_RS18790 0.88 -1.1 3,897,135 - -0.2 3,897,268 + BWI76_RS18800 0.37 -0.1
Or see this region's nucleotide sequence