Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07920 and BWI76_RS07925 are separated by 0 nucleotides BWI76_RS07925 and BWI76_RS07930 overlap by 16 nucleotides
BWI76_RS07920: BWI76_RS07920 - methionine aminotransferase, at 1,682,339 to 1,683,499
_RS07920
BWI76_RS07925: BWI76_RS07925 - hypothetical protein, at 1,683,500 to 1,684,129
_RS07925
BWI76_RS07930: BWI76_RS07930 - phosphoadenosine phosphosulfate reductase, at 1,684,114 to 1,685,337
_RS07930
Position (kb)
1683
1684
1685 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1682.737 kb on + strand, within BWI76_RS07920 at 1682.836 kb on + strand, within BWI76_RS07920 at 1682.842 kb on + strand, within BWI76_RS07920 at 1682.978 kb on + strand, within BWI76_RS07920 at 1683.133 kb on + strand, within BWI76_RS07920 at 1683.313 kb on + strand at 1683.400 kb on + strand at 1683.568 kb on - strand, within BWI76_RS07925 at 1683.627 kb on - strand, within BWI76_RS07925 at 1683.801 kb on + strand, within BWI76_RS07925 at 1683.814 kb on - strand, within BWI76_RS07925 at 1683.955 kb on - strand, within BWI76_RS07925 at 1683.978 kb on + strand, within BWI76_RS07925 at 1684.033 kb on + strand, within BWI76_RS07925 at 1684.065 kb on - strand, within BWI76_RS07925 at 1684.070 kb on + strand at 1684.105 kb on - strand at 1684.105 kb on - strand at 1684.131 kb on + strand at 1684.131 kb on + strand at 1684.139 kb on - strand at 1684.139 kb on - strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.208 kb on - strand at 1684.208 kb on - strand at 1684.208 kb on - strand at 1684.210 kb on + strand at 1684.237 kb on + strand, within BWI76_RS07930 at 1684.400 kb on + strand, within BWI76_RS07930 at 1684.405 kb on + strand, within BWI76_RS07930 at 1684.405 kb on + strand, within BWI76_RS07930 at 1684.408 kb on - strand, within BWI76_RS07930 at 1684.439 kb on + strand, within BWI76_RS07930 at 1684.442 kb on - strand, within BWI76_RS07930 at 1684.447 kb on - strand, within BWI76_RS07930 at 1684.460 kb on + strand, within BWI76_RS07930 at 1684.492 kb on - strand, within BWI76_RS07930 at 1684.492 kb on - strand, within BWI76_RS07930 at 1684.576 kb on + strand, within BWI76_RS07930 at 1684.581 kb on + strand, within BWI76_RS07930 at 1684.656 kb on + strand, within BWI76_RS07930 at 1684.664 kb on - strand, within BWI76_RS07930 at 1684.726 kb on + strand, within BWI76_RS07930 at 1684.749 kb on + strand, within BWI76_RS07930 at 1684.757 kb on - strand, within BWI76_RS07930 at 1684.848 kb on - strand, within BWI76_RS07930 at 1684.912 kb on + strand, within BWI76_RS07930 at 1684.920 kb on - strand, within BWI76_RS07930 at 1684.949 kb on - strand, within BWI76_RS07930 at 1685.003 kb on - strand, within BWI76_RS07930 at 1685.003 kb on - strand, within BWI76_RS07930 at 1685.015 kb on + strand, within BWI76_RS07930 at 1685.020 kb on + strand at 1685.045 kb on + strand, within BWI76_RS07930 at 1685.050 kb on + strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.063 kb on + strand, within BWI76_RS07930 at 1685.094 kb on - strand, within BWI76_RS07930 at 1685.111 kb on - strand, within BWI76_RS07930 at 1685.115 kb on + strand, within BWI76_RS07930 at 1685.115 kb on + strand, within BWI76_RS07930
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 1,682,737 + BWI76_RS07920 0.34 -0.4 1,682,836 + BWI76_RS07920 0.43 +0.1 1,682,842 + BWI76_RS07920 0.43 -1.8 1,682,978 + BWI76_RS07920 0.55 +0.1 1,683,133 + BWI76_RS07920 0.68 +0.2 1,683,313 + +0.4 1,683,400 + -0.2 1,683,568 - BWI76_RS07925 0.11 +0.4 1,683,627 - BWI76_RS07925 0.20 -1.0 1,683,801 + BWI76_RS07925 0.48 -1.4 1,683,814 - BWI76_RS07925 0.50 -1.0 1,683,955 - BWI76_RS07925 0.72 +0.2 1,683,978 + BWI76_RS07925 0.76 -0.6 1,684,033 + BWI76_RS07925 0.85 -2.1 1,684,065 - BWI76_RS07925 0.90 +0.1 1,684,070 + -3.4 1,684,105 - +0.3 1,684,105 - -0.5 1,684,131 + -0.0 1,684,131 + -3.6 1,684,139 - +0.7 1,684,139 - -0.7 1,684,200 + -1.7 1,684,200 + +1.1 1,684,200 + +0.8 1,684,200 + -0.0 1,684,200 + -0.4 1,684,208 - -0.4 1,684,208 - +0.0 1,684,208 - -1.1 1,684,210 + -0.1 1,684,237 + BWI76_RS07930 0.10 -1.1 1,684,400 + BWI76_RS07930 0.23 +0.5 1,684,405 + BWI76_RS07930 0.24 -3.4 1,684,405 + BWI76_RS07930 0.24 -1.7 1,684,408 - BWI76_RS07930 0.24 -0.2 1,684,439 + BWI76_RS07930 0.27 -0.6 1,684,442 - BWI76_RS07930 0.27 -0.7 1,684,447 - BWI76_RS07930 0.27 +1.1 1,684,460 + BWI76_RS07930 0.28 -1.7 1,684,492 - BWI76_RS07930 0.31 +0.1 1,684,492 - BWI76_RS07930 0.31 +0.0 1,684,576 + BWI76_RS07930 0.38 +0.1 1,684,581 + BWI76_RS07930 0.38 +0.5 1,684,656 + BWI76_RS07930 0.44 +0.2 1,684,664 - BWI76_RS07930 0.45 -0.8 1,684,726 + BWI76_RS07930 0.50 +1.7 1,684,749 + BWI76_RS07930 0.52 -0.4 1,684,757 - BWI76_RS07930 0.53 +0.8 1,684,848 - BWI76_RS07930 0.60 +0.5 1,684,912 + BWI76_RS07930 0.65 -1.4 1,684,920 - BWI76_RS07930 0.66 +0.2 1,684,949 - BWI76_RS07930 0.68 +0.5 1,685,003 - BWI76_RS07930 0.73 -1.0 1,685,003 - BWI76_RS07930 0.73 -1.1 1,685,015 + BWI76_RS07930 0.74 +1.3 1,685,020 + -0.1 1,685,045 + BWI76_RS07930 0.76 -3.1 1,685,050 + BWI76_RS07930 0.76 -0.8 1,685,058 - BWI76_RS07930 0.77 +3.8 1,685,058 - BWI76_RS07930 0.77 -0.1 1,685,058 - BWI76_RS07930 0.77 -0.0 1,685,058 - BWI76_RS07930 0.77 +0.8 1,685,063 + BWI76_RS07930 0.78 +0.6 1,685,094 - BWI76_RS07930 0.80 +0.7 1,685,111 - BWI76_RS07930 0.81 -0.3 1,685,115 + BWI76_RS07930 0.82 +0.7 1,685,115 + BWI76_RS07930 0.82 +2.7
Or see this region's nucleotide sequence