Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07735

Experiment: Glucuronamide (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07730 and BWI76_RS07735 are separated by 112 nucleotidesBWI76_RS07735 and BWI76_RS07740 are separated by 68 nucleotides BWI76_RS07730: BWI76_RS07730 - iron-enterobactin transporter membrane protein, at 1,639,556 to 1,640,563 _RS07730 BWI76_RS07735: BWI76_RS07735 - MFS transporter, at 1,640,676 to 1,641,917 _RS07735 BWI76_RS07740: BWI76_RS07740 - Fe2+-enterobactin ABC transporter substrate-binding protein, at 1,641,986 to 1,642,945 _RS07740 Position (kb) 1640 1641 1642Strain fitness (log2 ratio) -2 -1 0 1 2at 1640.043 kb on + strand, within BWI76_RS07730at 1640.527 kb on + strandat 1640.628 kb on + strandat 1640.681 kb on - strandat 1641.025 kb on + strand, within BWI76_RS07735at 1641.368 kb on + strand, within BWI76_RS07735at 1641.376 kb on - strand, within BWI76_RS07735at 1641.389 kb on + strand, within BWI76_RS07735at 1641.498 kb on + strand, within BWI76_RS07735at 1641.587 kb on + strand, within BWI76_RS07735at 1641.587 kb on + strand, within BWI76_RS07735at 1641.595 kb on - strand, within BWI76_RS07735at 1641.860 kb on - strandat 1642.278 kb on - strand, within BWI76_RS07740at 1642.726 kb on - strand, within BWI76_RS07740

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Per-strain Table

Position Strand Gene LocusTag Fraction Glucuronamide (N)
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1,640,043 + BWI76_RS07730 0.48 +0.3
1,640,527 + +1.5
1,640,628 + -0.7
1,640,681 - +0.4
1,641,025 + BWI76_RS07735 0.28 -0.1
1,641,368 + BWI76_RS07735 0.56 -1.2
1,641,376 - BWI76_RS07735 0.56 -0.9
1,641,389 + BWI76_RS07735 0.57 -0.3
1,641,498 + BWI76_RS07735 0.66 -0.9
1,641,587 + BWI76_RS07735 0.73 -1.2
1,641,587 + BWI76_RS07735 0.73 -2.2
1,641,595 - BWI76_RS07735 0.74 +0.7
1,641,860 - -0.4
1,642,278 - BWI76_RS07740 0.30 +2.4
1,642,726 - BWI76_RS07740 0.77 +1.1

Or see this region's nucleotide sequence