Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07505 and BWI76_RS07510 are separated by 173 nucleotides BWI76_RS07510 and BWI76_RS07515 are separated by 52 nucleotides BWI76_RS07515 and BWI76_RS07520 are separated by 324 nucleotides
BWI76_RS07505: BWI76_RS07505 - hydrophobe/amphiphile efflux-1 family RND transporter, at 1,585,689 to 1,588,781
_RS07505
BWI76_RS07510: BWI76_RS07510 - hypothetical protein, at 1,588,955 to 1,589,674
_RS07510
BWI76_RS07515: BWI76_RS07515 - glutamate--cysteine ligase, at 1,589,727 to 1,590,842
_RS07515
BWI76_RS07520: BWI76_RS07520 - ABC transporter substrate-binding protein, at 1,591,167 to 1,592,831
_RS07520
Position (kb)
1589
1590
1591 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1588.804 kb on - strand at 1588.880 kb on + strand at 1589.081 kb on - strand, within BWI76_RS07510 at 1589.166 kb on + strand, within BWI76_RS07510 at 1589.166 kb on + strand, within BWI76_RS07510 at 1589.233 kb on + strand, within BWI76_RS07510 at 1589.691 kb on + strand at 1589.716 kb on - strand at 1589.732 kb on - strand at 1589.846 kb on + strand, within BWI76_RS07515 at 1589.991 kb on - strand, within BWI76_RS07515 at 1590.009 kb on - strand, within BWI76_RS07515 at 1590.213 kb on - strand, within BWI76_RS07515 at 1590.588 kb on + strand, within BWI76_RS07515 at 1590.715 kb on + strand, within BWI76_RS07515 at 1590.723 kb on - strand, within BWI76_RS07515 at 1590.742 kb on - strand at 1590.744 kb on + strand at 1590.786 kb on - strand at 1590.793 kb on - strand at 1590.837 kb on + strand at 1590.852 kb on + strand at 1590.860 kb on - strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.872 kb on + strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.880 kb on - strand at 1590.882 kb on - strand at 1590.886 kb on + strand at 1590.946 kb on + strand at 1590.954 kb on - strand at 1590.973 kb on - strand at 1590.979 kb on - strand at 1590.983 kb on - strand at 1591.105 kb on + strand at 1591.123 kb on - strand at 1591.156 kb on + strand at 1591.162 kb on + strand at 1591.162 kb on + strand at 1591.162 kb on + strand at 1591.162 kb on + strand at 1591.165 kb on - strand at 1591.170 kb on - strand at 1591.170 kb on - strand at 1591.205 kb on - strand at 1591.207 kb on + strand at 1591.207 kb on + strand at 1591.215 kb on - strand at 1591.215 kb on - strand at 1591.215 kb on - strand at 1591.215 kb on - strand at 1591.251 kb on + strand at 1591.256 kb on + strand at 1591.256 kb on + strand at 1591.256 kb on + strand at 1591.256 kb on + strand at 1591.259 kb on - strand at 1591.259 kb on - strand at 1591.264 kb on - strand at 1591.264 kb on - strand at 1591.264 kb on - strand at 1591.264 kb on - strand at 1591.264 kb on - strand at 1591.264 kb on - strand at 1591.403 kb on - strand, within BWI76_RS07520 at 1591.520 kb on - strand, within BWI76_RS07520 at 1591.556 kb on - strand, within BWI76_RS07520 at 1591.586 kb on + strand, within BWI76_RS07520 at 1591.622 kb on - strand, within BWI76_RS07520 at 1591.663 kb on + strand, within BWI76_RS07520 at 1591.687 kb on + strand, within BWI76_RS07520 at 1591.715 kb on + strand, within BWI76_RS07520
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 1,588,804 - +0.3 1,588,880 + -0.4 1,589,081 - BWI76_RS07510 0.17 +1.9 1,589,166 + BWI76_RS07510 0.29 +1.6 1,589,166 + BWI76_RS07510 0.29 +1.4 1,589,233 + BWI76_RS07510 0.39 +0.9 1,589,691 + +0.2 1,589,716 - +1.1 1,589,732 - +1.2 1,589,846 + BWI76_RS07515 0.11 -0.1 1,589,991 - BWI76_RS07515 0.24 -0.5 1,590,009 - BWI76_RS07515 0.25 -2.5 1,590,213 - BWI76_RS07515 0.44 -2.0 1,590,588 + BWI76_RS07515 0.77 -1.2 1,590,715 + BWI76_RS07515 0.89 -0.9 1,590,723 - BWI76_RS07515 0.89 -1.6 1,590,742 - +0.1 1,590,744 + +0.3 1,590,786 - +1.4 1,590,793 - +1.1 1,590,837 + +0.7 1,590,852 + -3.8 1,590,860 - +0.1 1,590,872 + -1.1 1,590,872 + -0.8 1,590,872 + +1.2 1,590,872 + +0.9 1,590,872 + +0.7 1,590,872 + +0.4 1,590,872 + +0.1 1,590,872 + +0.2 1,590,872 + -2.2 1,590,872 + +1.2 1,590,880 - -0.5 1,590,880 - -0.9 1,590,880 - +0.8 1,590,880 - -0.4 1,590,880 - -3.0 1,590,880 - +1.0 1,590,880 - -1.5 1,590,880 - +0.3 1,590,880 - +0.4 1,590,880 - +0.2 1,590,880 - +0.9 1,590,880 - -2.1 1,590,880 - -0.7 1,590,880 - -0.2 1,590,880 - -0.3 1,590,880 - +0.6 1,590,880 - -0.9 1,590,880 - -2.5 1,590,880 - -0.7 1,590,880 - -1.7 1,590,880 - -0.7 1,590,880 - -0.5 1,590,880 - -1.1 1,590,882 - +0.4 1,590,886 + +0.6 1,590,946 + -0.8 1,590,954 - +1.3 1,590,973 - +0.4 1,590,979 - +0.5 1,590,983 - -1.9 1,591,105 + -2.6 1,591,123 - -0.9 1,591,156 + -0.6 1,591,162 + +1.5 1,591,162 + -1.0 1,591,162 + +0.1 1,591,162 + -0.1 1,591,165 - +1.7 1,591,170 - +0.4 1,591,170 - -2.3 1,591,205 - +0.9 1,591,207 + -0.1 1,591,207 + +0.0 1,591,215 - -0.8 1,591,215 - -1.9 1,591,215 - -1.0 1,591,215 - -0.4 1,591,251 + -0.8 1,591,256 + +0.6 1,591,256 + +0.7 1,591,256 + +1.7 1,591,256 + +0.5 1,591,259 - -1.2 1,591,259 - -2.4 1,591,264 - +0.4 1,591,264 - -1.6 1,591,264 - -0.1 1,591,264 - -0.2 1,591,264 - -1.1 1,591,264 - +1.0 1,591,403 - BWI76_RS07520 0.14 -0.2 1,591,520 - BWI76_RS07520 0.21 -0.1 1,591,556 - BWI76_RS07520 0.23 +1.0 1,591,586 + BWI76_RS07520 0.25 -0.0 1,591,622 - BWI76_RS07520 0.27 +0.4 1,591,663 + BWI76_RS07520 0.30 -1.6 1,591,687 + BWI76_RS07520 0.31 -0.7 1,591,715 + BWI76_RS07520 0.33 +0.1
Or see this region's nucleotide sequence