Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5200

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
5,996,033	+		Pf6N2E2_5199	0.73	+0.7
5,996,033	+		Pf6N2E2_5199	0.73	-0.2
5,996,130	-		Pf6N2E2_5199	0.77	-0.1
5,996,130	-		Pf6N2E2_5199	0.77	-2.2
5,996,275	-		Pf6N2E2_5199	0.84	+1.1
5,996,297	+		Pf6N2E2_5199	0.85	+0.2
5,996,297	+		Pf6N2E2_5199	0.85	+2.0
5,996,297	+		Pf6N2E2_5199	0.85	+0.1
5,996,297	+		Pf6N2E2_5199	0.85	-1.5
5,996,297	+		Pf6N2E2_5199	0.85	-0.3
5,996,298	-		Pf6N2E2_5199	0.86	+1.0
5,996,482	-				-0.2
5,996,488	+				-0.7
5,996,489	-				+1.4
5,996,512	-				-0.2
5,996,581	+				-0.9
5,996,582	-				-1.7
5,996,625	-				-1.5
5,996,641	+				-1.4
5,996,669	+				-0.5
5,996,670	-				+0.2
5,996,704	+				+0.7
5,996,748	+				-0.4
5,996,748	+				+0.1
5,996,748	+				+0.6
5,996,748	+				-0.0
5,996,748	+				-1.3
5,996,749	-				-1.3
5,996,749	-				-0.6
5,996,749	-				+0.8
5,996,763	+				+0.2
5,996,763	+				+0.5
5,996,764	-				-0.6
5,996,777	-				+0.8
5,996,843	+				+1.0
5,996,844	-				+0.7
5,996,844	-				-1.7
5,996,915	+				+1.9
5,996,916	-				-0.1
5,996,916	-				+0.9
5,997,069	+		Pf6N2E2_5200	0.12	+0.7
5,997,090	+		Pf6N2E2_5200	0.13	+0.7
5,997,090	+		Pf6N2E2_5200	0.13	-0.4
5,997,090	+		Pf6N2E2_5200	0.13	-0.4
5,997,090	+		Pf6N2E2_5200	0.13	+0.9
5,997,090	+		Pf6N2E2_5200	0.13	-0.1
5,997,090	+		Pf6N2E2_5200	0.13	-0.0
5,997,091	-		Pf6N2E2_5200	0.13	+1.4
5,997,091	-		Pf6N2E2_5200	0.13	+0.0
5,997,091	-		Pf6N2E2_5200	0.13	+0.4
5,997,091	-		Pf6N2E2_5200	0.13	+0.5
5,997,461	+		Pf6N2E2_5200	0.44	+0.1
5,997,461	+		Pf6N2E2_5200	0.44	+0.5
5,997,461	+		Pf6N2E2_5200	0.44	+0.1
5,997,461	+		Pf6N2E2_5200	0.44	-0.3
5,997,461	+		Pf6N2E2_5200	0.44	-0.5
5,997,461	+		Pf6N2E2_5200	0.44	-1.5
5,997,462	-		Pf6N2E2_5200	0.44	+0.3
5,997,462	-		Pf6N2E2_5200	0.44	-0.2
5,997,462	-		Pf6N2E2_5200	0.44	-0.7
5,997,462	-		Pf6N2E2_5200	0.44	+1.6
5,997,462	-		Pf6N2E2_5200	0.44	-1.9
5,997,510	+		Pf6N2E2_5200	0.48	+0.5
5,997,511	-		Pf6N2E2_5200	0.48	-0.0
5,997,645	+		Pf6N2E2_5200	0.59	+0.2
5,997,646	-		Pf6N2E2_5200	0.59	-0.7
5,997,651	+		Pf6N2E2_5200	0.59	-0.3
5,997,651	+		Pf6N2E2_5200	0.59	+0.6
5,997,651	+		Pf6N2E2_5200	0.59	+0.7
5,997,651	+		Pf6N2E2_5200	0.59	+0.2
5,997,651	+		Pf6N2E2_5200	0.59	+1.1
5,997,651	+		Pf6N2E2_5200	0.59	+1.4
5,997,651	+		Pf6N2E2_5200	0.59	+0.4
5,997,652	-		Pf6N2E2_5200	0.59	+0.4
5,997,652	-		Pf6N2E2_5200	0.59	+1.0
5,997,652	-		Pf6N2E2_5200	0.59	+0.5
5,997,652	-		Pf6N2E2_5200	0.59	+0.1
5,997,652	-		Pf6N2E2_5200	0.59	+0.1
5,997,652	-		Pf6N2E2_5200	0.59	+0.7
5,997,672	+		Pf6N2E2_5200	0.61	-1.8
5,997,672	+		Pf6N2E2_5200	0.61	+1.1
5,997,672	+		Pf6N2E2_5200	0.61	-1.4
5,997,672	+		Pf6N2E2_5200	0.61	-0.1
5,997,672	+		Pf6N2E2_5200	0.61	-0.6
5,997,672	+		Pf6N2E2_5200	0.61	+1.6
5,997,673	-		Pf6N2E2_5200	0.61	+0.8
5,997,673	-		Pf6N2E2_5200	0.61	+0.1
5,997,673	-		Pf6N2E2_5200	0.61	+2.0
5,997,673	-		Pf6N2E2_5200	0.61	+1.8
5,997,684	+		Pf6N2E2_5200	0.62	-0.8
5,997,685	-		Pf6N2E2_5200	0.62	+0.8
5,997,685	-		Pf6N2E2_5200	0.62	-0.2
5,997,685	-		Pf6N2E2_5200	0.62	+1.1
5,997,942	+		Pf6N2E2_5200	0.83	-0.3
5,997,942	+		Pf6N2E2_5200	0.83	+0.3
5,997,942	+		Pf6N2E2_5200	0.83	+0.6
5,997,942	+		Pf6N2E2_5200	0.83	+0.2
5,997,942	+		Pf6N2E2_5200	0.83	-1.8
5,997,942	+		Pf6N2E2_5200	0.83	+0.3
5,997,943	-		Pf6N2E2_5200	0.83	+2.5
5,997,943	-		Pf6N2E2_5200	0.83	-0.7
5,997,943	-		Pf6N2E2_5200	0.83	+1.6
5,997,943	-		Pf6N2E2_5200	0.83	-0.2
5,997,943	-		Pf6N2E2_5200	0.83	+2.0
5,997,943	-		Pf6N2E2_5200	0.83	-0.2
5,998,068	+				-0.5
5,998,068	+				-0.2
5,998,068	+				-0.3
5,998,068	+				-0.5
5,998,068	+				-0.7
5,998,068	+				-1.2
5,998,069	-				-1.3
5,998,069	-				-0.0
5,998,069	-				-0.5
5,998,069	-				-0.7
5,998,069	-				+0.4
5,998,069	-				+1.0
5,998,069	-				+1.3
5,998,075	-				+0.6
5,998,075	-				+0.5
5,998,162	+				+0.5
5,998,162	+				-0.7
5,998,162	+				+0.5
5,998,162	+				-1.1
5,998,162	+				+0.6
5,998,162	+				-1.0
5,998,163	-				+0.9
5,998,327	-				+0.3
5,998,327	-				-0.0
5,998,327	-				+0.6
5,998,327	-				-0.6
5,998,327	-				-0.4
5,998,331	-				+1.8
5,998,331	-				-1.3
5,998,331	-				-0.0
5,998,331	-				+0.8
5,998,331	-				+0.0
5,998,331	-				+0.1
5,998,455	+				+0.2
5,998,455	+				-2.6
5,998,455	+				+0.3
5,998,456	-				+0.5
5,998,456	-				-1.1
5,998,456	-				+0.7
5,998,497	+				+0.9
5,998,497	+				-0.0
5,998,498	-				+0.0
5,998,498	-				-0.0
5,998,498	-				+0.6
5,998,498	-				+0.7
5,998,498	-				+0.2
5,998,498	-				+1.6
5,998,538	+				+0.3
5,998,551	+		Pf6N2E2_5201	0.10	+0.8
5,998,551	+		Pf6N2E2_5201	0.10	+1.0
5,998,552	-		Pf6N2E2_5201	0.10	-0.7
5,998,552	-		Pf6N2E2_5201	0.10	-0.5
5,998,590	+		Pf6N2E2_5201	0.12	-1.3
5,998,590	+		Pf6N2E2_5201	0.12	+1.6
5,998,590	+		Pf6N2E2_5201	0.12	+0.8
5,998,591	-		Pf6N2E2_5201	0.12	+1.1
5,998,672	+		Pf6N2E2_5201	0.15	-0.0
5,998,672	+		Pf6N2E2_5201	0.15	+0.3
5,998,672	+		Pf6N2E2_5201	0.15	-0.3
5,998,672	+		Pf6N2E2_5201	0.15	+0.8
5,998,673	-		Pf6N2E2_5201	0.16	+0.1
5,998,673	-		Pf6N2E2_5201	0.16	+0.9
5,998,683	-		Pf6N2E2_5201	0.16	+0.3
5,998,689	+		Pf6N2E2_5201	0.16	-0.9
5,998,690	-		Pf6N2E2_5201	0.16	+1.6
5,998,690	-		Pf6N2E2_5201	0.16	-0.1
5,998,710	+		Pf6N2E2_5201	0.17	+0.3
5,998,710	+		Pf6N2E2_5201	0.17	-0.2
5,998,710	+		Pf6N2E2_5201	0.17	-0.5
5,998,711	-		Pf6N2E2_5201	0.17	+0.8
5,998,711	-		Pf6N2E2_5201	0.17	-1.6
5,998,711	-		Pf6N2E2_5201	0.17	-0.7
5,998,711	-		Pf6N2E2_5201	0.17	+0.3
5,998,711	-		Pf6N2E2_5201	0.17	-1.9
5,998,711	-		Pf6N2E2_5201	0.17	+0.0
5,998,711	-		Pf6N2E2_5201	0.17	-0.9
5,998,711	-		Pf6N2E2_5201	0.17	-0.2
5,998,716	+		Pf6N2E2_5201	0.17	+0.7
5,998,818	+		Pf6N2E2_5201	0.22	+1.2
5,998,818	+		Pf6N2E2_5201	0.22	+1.3
5,998,818	+		Pf6N2E2_5201	0.22	-0.2
5,998,852	-		Pf6N2E2_5201	0.23	-0.7
5,998,860	+		Pf6N2E2_5201	0.24	-0.3
5,998,861	-		Pf6N2E2_5201	0.24	-2.1
5,998,861	-		Pf6N2E2_5201	0.24	+1.0
5,998,861	-		Pf6N2E2_5201	0.24	-0.1
5,998,887	+		Pf6N2E2_5201	0.25	+0.0
5,998,887	+		Pf6N2E2_5201	0.25	+0.4
5,998,887	+		Pf6N2E2_5201	0.25	+0.2
5,998,888	-		Pf6N2E2_5201	0.25	-0.1
5,998,896	+		Pf6N2E2_5201	0.25	-0.9
5,998,897	-		Pf6N2E2_5201	0.25	+0.4
5,998,897	-		Pf6N2E2_5201	0.25	+0.6
5,998,924	+		Pf6N2E2_5201	0.26	+0.6
5,998,924	+		Pf6N2E2_5201	0.26	-0.9
5,998,938	+		Pf6N2E2_5201	0.27	-1.0
5,998,938	+		Pf6N2E2_5201	0.27	-0.3
5,998,939	-		Pf6N2E2_5201	0.27	+0.1
5,998,939	-		Pf6N2E2_5201	0.27	+0.4
5,998,944	+		Pf6N2E2_5201	0.27	-1.3
5,998,944	+		Pf6N2E2_5201	0.27	+0.8
5,998,944	+		Pf6N2E2_5201	0.27	-0.2
5,998,944	+		Pf6N2E2_5201	0.27	-0.2
5,998,944	+		Pf6N2E2_5201	0.27	-0.1
5,998,944	+		Pf6N2E2_5201	0.27	+0.7
5,998,944	+		Pf6N2E2_5201	0.27	-0.1
5,998,944	+		Pf6N2E2_5201	0.27	+0.6
5,998,944	+		Pf6N2E2_5201	0.27	+0.4
5,998,945	-		Pf6N2E2_5201	0.27	+0.3
5,998,945	-		Pf6N2E2_5201	0.27	+0.3
5,998,945	-		Pf6N2E2_5201	0.27	-0.4
5,998,945	-		Pf6N2E2_5201	0.27	-0.3
5,998,945	-		Pf6N2E2_5201	0.27	-0.8
5,998,945	-				+1.1
5,998,953	+		Pf6N2E2_5201	0.28	-0.4
5,998,953	+		Pf6N2E2_5201	0.28	+0.7
5,998,953	+		Pf6N2E2_5201	0.28	-0.4
5,998,953	+		Pf6N2E2_5201	0.28	+1.1
5,998,954	-		Pf6N2E2_5201	0.28	+2.1
5,998,992	+		Pf6N2E2_5201	0.29	+0.3
5,998,993	-		Pf6N2E2_5201	0.29	-0.9
5,999,017	+		Pf6N2E2_5201	0.30	+0.6
5,999,017	+		Pf6N2E2_5201	0.30	-0.9
5,999,017	+		Pf6N2E2_5201	0.30	+0.4
5,999,018	-		Pf6N2E2_5201	0.31	+1.3
5,999,018	-		Pf6N2E2_5201	0.31	-0.1
5,999,018	-		Pf6N2E2_5201	0.31	+0.1
5,999,077	+		Pf6N2E2_5201	0.33	+0.3
5,999,077	+		Pf6N2E2_5201	0.33	-0.3
5,999,077	+		Pf6N2E2_5201	0.33	+0.5
5,999,077	+		Pf6N2E2_5201	0.33	-0.5
5,999,077	+		Pf6N2E2_5201	0.33	+0.9
5,999,077	+		Pf6N2E2_5201	0.33	+0.5
5,999,078	-		Pf6N2E2_5201	0.33	+0.7
5,999,078	-		Pf6N2E2_5201	0.33	+0.1
5,999,079	+		Pf6N2E2_5201	0.33	-1.3
5,999,079	+		Pf6N2E2_5201	0.33	-0.7
5,999,079	+		Pf6N2E2_5201	0.33	-0.4
5,999,080	-		Pf6N2E2_5201	0.33	-0.9
5,999,080	-		Pf6N2E2_5201	0.33	+2.7
5,999,080	-		Pf6N2E2_5201	0.33	+1.1
5,999,080	-		Pf6N2E2_5201	0.33	+0.6
5,999,080	-		Pf6N2E2_5201	0.33	+0.6