Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3582

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
4,172,973	+		Pf6N2E2_3581	0.40	+0.6
4,172,973	+		Pf6N2E2_3581	0.40	-0.5
4,172,973	+		Pf6N2E2_3581	0.40	-0.3
4,172,973	+		Pf6N2E2_3581	0.40	-0.4
4,172,974	-		Pf6N2E2_3581	0.40	+0.9
4,172,974	-		Pf6N2E2_3581	0.40	-1.1
4,172,974	-		Pf6N2E2_3581	0.40	-1.1
4,172,976	+		Pf6N2E2_3581	0.40	+0.2
4,172,976	+		Pf6N2E2_3581	0.40	-0.4
4,172,976	+		Pf6N2E2_3581	0.40	+1.3
4,172,976	+		Pf6N2E2_3581	0.40	+1.1
4,172,977	-		Pf6N2E2_3581	0.41	+0.0
4,172,977	-		Pf6N2E2_3581	0.41	-2.0
4,173,027	+		Pf6N2E2_3581	0.44	+0.7
4,173,183	+		Pf6N2E2_3581	0.57	+0.8
4,173,399	+		Pf6N2E2_3581	0.73	-0.3
4,173,399	+		Pf6N2E2_3581	0.73	-0.3
4,173,399	+		Pf6N2E2_3581	0.73	-0.3
4,173,399	+		Pf6N2E2_3581	0.73	-1.2
4,173,400	-		Pf6N2E2_3581	0.74	+0.0
4,173,400	-		Pf6N2E2_3581	0.74	+0.6
4,173,400	-		Pf6N2E2_3581	0.74	+0.7
4,173,400	-		Pf6N2E2_3581	0.74	-0.1
4,173,400	-		Pf6N2E2_3581	0.74	-0.4
4,173,400	-		Pf6N2E2_3581	0.74	-0.7
4,173,400	-		Pf6N2E2_3581	0.74	-0.4
4,173,400	-		Pf6N2E2_3581	0.74	-0.1
4,173,509	+		Pf6N2E2_3581	0.82	+1.1
4,173,510	-		Pf6N2E2_3581	0.82	-1.7
4,173,717	-				-1.1
4,173,717	-				+0.2
4,173,833	+				+1.2
4,173,833	+				-0.5
4,173,834	-				-0.7
4,173,843	+				-1.9
4,173,843	+				+0.8
4,173,843	+				-0.1
4,173,843	+				+0.8
4,173,844	-				+0.6
4,173,844	-				+0.1
4,173,844	-				+0.5
4,173,844	-				-0.0
4,173,875	+				-1.5
4,173,876	-				-0.9
4,173,876	-				+0.1
4,173,906	-				-0.2
4,173,906	-				-1.8
4,174,072	-		Pf6N2E2_3582	0.16	+0.1
4,174,139	+		Pf6N2E2_3582	0.21	+0.8
4,174,139	+		Pf6N2E2_3582	0.21	-1.9
4,174,140	-		Pf6N2E2_3582	0.21	-0.5
4,174,140	-		Pf6N2E2_3582	0.21	+1.0
4,174,151	+		Pf6N2E2_3582	0.21	+0.8
4,174,151	+		Pf6N2E2_3582	0.21	-0.9
4,174,151	+		Pf6N2E2_3582	0.21	+0.6
4,174,151	+		Pf6N2E2_3582	0.21	+1.0
4,174,151	+		Pf6N2E2_3582	0.21	-0.1
4,174,151	+		Pf6N2E2_3582	0.21	-1.0
4,174,152	-		Pf6N2E2_3582	0.21	+0.8
4,174,152	-		Pf6N2E2_3582	0.21	-1.6
4,174,152	-		Pf6N2E2_3582	0.21	+0.8
4,174,152	-		Pf6N2E2_3582	0.21	+0.5
4,174,152	-		Pf6N2E2_3582	0.21	-0.3
4,174,152	-		Pf6N2E2_3582	0.21	-1.0
4,174,152	-		Pf6N2E2_3582	0.21	+0.1
4,174,226	+		Pf6N2E2_3582	0.26	-0.3
4,174,226	+		Pf6N2E2_3582	0.26	+0.1
4,174,226	+		Pf6N2E2_3582	0.26	+0.9
4,174,226	+		Pf6N2E2_3582	0.26	-0.4
4,174,226	+		Pf6N2E2_3582	0.26	-0.5
4,174,226	+		Pf6N2E2_3582	0.26	+1.4
4,174,226	+		Pf6N2E2_3582	0.26	-0.8
4,174,226	+		Pf6N2E2_3582	0.26	-0.7
4,174,226	+		Pf6N2E2_3582	0.26	+0.0
4,174,226	+		Pf6N2E2_3582	0.26	+0.7
4,174,226	+		Pf6N2E2_3582	0.26	+0.5
4,174,226	+		Pf6N2E2_3582	0.26	+0.8
4,174,226	+		Pf6N2E2_3582	0.26	+0.6
4,174,227	-		Pf6N2E2_3582	0.26	-0.3
4,174,227	-		Pf6N2E2_3582	0.26	-1.0
4,174,227	-		Pf6N2E2_3582	0.26	+1.3
4,174,227	-		Pf6N2E2_3582	0.26	+0.8
4,174,227	-		Pf6N2E2_3582	0.26	+0.4
4,174,227	-		Pf6N2E2_3582	0.26	-0.2
4,174,227	-		Pf6N2E2_3582	0.26	+0.6
4,174,227	-		Pf6N2E2_3582	0.26	-0.0
4,174,227	-		Pf6N2E2_3582	0.26	-0.3
4,174,227	-		Pf6N2E2_3582	0.26	+0.1
4,174,227	-		Pf6N2E2_3582	0.26	+0.6
4,174,227	-		Pf6N2E2_3582	0.26	-0.1
4,174,227	-		Pf6N2E2_3582	0.26	-0.1
4,174,229	+		Pf6N2E2_3582	0.27	+0.5
4,174,229	+		Pf6N2E2_3582	0.27	+0.6
4,174,229	+		Pf6N2E2_3582	0.27	+0.3
4,174,229	+		Pf6N2E2_3582	0.27	-0.5
4,174,229	+		Pf6N2E2_3582	0.27	+1.3
4,174,230	-		Pf6N2E2_3582	0.27	+1.3
4,174,574	-		Pf6N2E2_3582	0.50	+1.0
4,174,574	-		Pf6N2E2_3582	0.50	-0.2
4,174,574	-		Pf6N2E2_3582	0.50	-0.1
4,174,574	-		Pf6N2E2_3582	0.50	-0.3
4,174,964	+		Pf6N2E2_3582	0.76	+0.3
4,175,087	+		Pf6N2E2_3582	0.84	+0.2
4,175,087	+		Pf6N2E2_3582	0.84	+0.4
4,175,087	+		Pf6N2E2_3582	0.84	+0.8
4,175,087	+		Pf6N2E2_3582	0.84	+0.2
4,175,087	+		Pf6N2E2_3582	0.84	+1.3
4,175,088	-		Pf6N2E2_3582	0.84	+0.9
4,175,088	-		Pf6N2E2_3582	0.84	+0.5
4,175,088	-		Pf6N2E2_3582	0.84	+0.1
4,175,088	-		Pf6N2E2_3582	0.84	+0.3
4,175,088	-		Pf6N2E2_3582	0.84	+0.9
4,175,088	-		Pf6N2E2_3582	0.84	+0.7
4,175,088	-		Pf6N2E2_3582	0.84	-0.2
4,175,255	-				+0.1
4,175,277	-				+0.6
4,175,387	+		Pf6N2E2_3583	0.28	+0.8
4,175,387	+		Pf6N2E2_3583	0.28	-0.7
4,175,387	+		Pf6N2E2_3583	0.28	-0.3
4,175,387	+		Pf6N2E2_3583	0.28	+0.2
4,175,387	+		Pf6N2E2_3583	0.28	-0.4
4,175,387	+		Pf6N2E2_3583	0.28	+0.1
4,175,387	+		Pf6N2E2_3583	0.28	-0.5
4,175,387	+		Pf6N2E2_3583	0.28	-0.6
4,175,387	+		Pf6N2E2_3583	0.28	-0.6
4,175,387	+		Pf6N2E2_3583	0.28	+0.2
4,175,387	+		Pf6N2E2_3583	0.28	+0.7
4,175,388	-		Pf6N2E2_3583	0.29	-0.4
4,175,388	-		Pf6N2E2_3583	0.29	-0.1
4,175,388	-		Pf6N2E2_3583	0.29	+0.5
4,175,388	-		Pf6N2E2_3583	0.29	+0.1
4,175,388	-		Pf6N2E2_3583	0.29	+0.2
4,175,393	+		Pf6N2E2_3583	0.33	-1.1
4,175,393	+		Pf6N2E2_3583	0.33	-0.4
4,175,393	+		Pf6N2E2_3583	0.33	+0.8
4,175,394	-		Pf6N2E2_3583	0.34	+0.2
4,175,394	-		Pf6N2E2_3583	0.34	+0.0
4,175,394	-		Pf6N2E2_3583	0.34	-0.6
4,175,394	-		Pf6N2E2_3583	0.34	+0.3
4,175,427	-		Pf6N2E2_3583	0.62	-0.9
4,175,435	+		Pf6N2E2_3583	0.68	+1.3
4,175,435	+		Pf6N2E2_3583	0.68	+0.1
4,175,436	-		Pf6N2E2_3583	0.69	-0.2
4,175,436	-		Pf6N2E2_3583	0.69	-0.1
4,175,436	-		Pf6N2E2_3583	0.69	-0.4
4,175,447	+		Pf6N2E2_3583	0.78	-0.9
4,175,489	+				-0.7
4,175,490	-				+0.1
4,175,490	-				+0.5
4,175,490	-				-0.2
4,175,499	+				+0.8
4,175,499	+				+1.3
4,175,499	+				+0.5
4,175,499	+				+0.1
4,175,499	+				-0.5
4,175,499	+				-0.5
4,175,499	+				-0.5
4,175,499	+				+0.3
4,175,499	+				-1.0
4,175,499	+				+0.0
4,175,499	+				+0.9
4,175,500	-				-1.7
4,175,500	-				-0.1
4,175,500	-				-0.2
4,175,500	-				-0.2
4,175,508	+				-1.4
4,175,508	+				+1.1
4,175,508	+				+0.3
4,175,508	+				-0.8
4,175,509	-				-0.2
4,175,516	-				-0.7
4,175,516	-				+0.7
4,175,516	-				+1.0
4,175,710	+		Pf6N2E2_3584	0.23	+1.3
4,175,710	+		Pf6N2E2_3584	0.23	+0.5
4,175,711	-		Pf6N2E2_3584	0.23	-0.1
4,175,711	-		Pf6N2E2_3584	0.23	+0.1
4,175,754	+		Pf6N2E2_3584	0.28	+0.2
4,175,761	+		Pf6N2E2_3584	0.29	-0.2
4,175,761	+		Pf6N2E2_3584	0.29	+0.4
4,175,762	-		Pf6N2E2_3584	0.29	+2.3
4,175,762	-		Pf6N2E2_3584	0.29	-0.5
4,175,762	-		Pf6N2E2_3584	0.29	+0.1
4,175,762	-		Pf6N2E2_3584	0.29	+1.5
4,175,762	-		Pf6N2E2_3584	0.29	+1.2
4,175,773	+		Pf6N2E2_3584	0.30	-0.2
4,175,773	+		Pf6N2E2_3584	0.30	+0.3
4,175,774	-		Pf6N2E2_3584	0.30	+0.0
4,175,944	+		Pf6N2E2_3584	0.49	+0.4
4,175,945	-		Pf6N2E2_3584	0.49	-0.1
4,176,133	+		Pf6N2E2_3584	0.70	+0.3
4,176,147	+		Pf6N2E2_3584	0.71	-1.0
4,176,147	+		Pf6N2E2_3584	0.71	+0.2
4,176,147	+		Pf6N2E2_3584	0.71	+0.2
4,176,147	+		Pf6N2E2_3584	0.71	-1.7
4,176,147	+		Pf6N2E2_3584	0.71	+1.2
4,176,147	+		Pf6N2E2_3584	0.71	+0.3
4,176,147	+		Pf6N2E2_3584	0.71	-0.6
4,176,147	+		Pf6N2E2_3584	0.71	-2.7
4,176,147	+		Pf6N2E2_3584	0.71	-0.8
4,176,147	+		Pf6N2E2_3584	0.71	+0.5
4,176,147	+		Pf6N2E2_3584	0.71	+0.3
4,176,147	+		Pf6N2E2_3584	0.71	-0.6
4,176,147	+		Pf6N2E2_3584	0.71	-0.6
4,176,147	+		Pf6N2E2_3584	0.71	-0.2
4,176,147	+		Pf6N2E2_3584	0.71	+0.5
4,176,147	+		Pf6N2E2_3584	0.71	-0.5
4,176,147	+		Pf6N2E2_3584	0.71	+0.2
4,176,147	+		Pf6N2E2_3584	0.71	+0.7
4,176,147	+		Pf6N2E2_3584	0.71	+0.0
4,176,147	+		Pf6N2E2_3584	0.71	+0.3
4,176,147	+		Pf6N2E2_3584	0.71	-0.2
4,176,147	+		Pf6N2E2_3584	0.71	+0.8
4,176,147	+		Pf6N2E2_3584	0.71	-0.2
4,176,147	+		Pf6N2E2_3584	0.71	+0.5
4,176,148	-		Pf6N2E2_3584	0.71	-0.5
4,176,148	-		Pf6N2E2_3584	0.71	+0.4
4,176,148	-		Pf6N2E2_3584	0.71	-0.5
4,176,148	-		Pf6N2E2_3584	0.71	+0.1
4,176,148	-		Pf6N2E2_3584	0.71	-0.5
4,176,148	-		Pf6N2E2_3584	0.71	-0.7
4,176,148	-		Pf6N2E2_3584	0.71	-0.4
4,176,148	-		Pf6N2E2_3584	0.71	-0.5
4,176,148	-		Pf6N2E2_3584	0.71	-1.4
4,176,148	-		Pf6N2E2_3584	0.71	+0.2
4,176,148	-		Pf6N2E2_3584	0.71	+0.3
4,176,148	-		Pf6N2E2_3584	0.71	+0.5
4,176,148	-		Pf6N2E2_3584	0.71	-0.6
4,176,148	-		Pf6N2E2_3584	0.71	+1.0
4,176,148	-		Pf6N2E2_3584	0.71	+0.2
4,176,148	-		Pf6N2E2_3584	0.71	-0.7
4,176,148	-		Pf6N2E2_3584	0.71	-0.6
4,176,148	-		Pf6N2E2_3584	0.71	-0.6
4,176,151	+		Pf6N2E2_3584	0.72	-1.8
4,176,151	+		Pf6N2E2_3584	0.72	+0.5
4,176,151	+		Pf6N2E2_3584	0.72	+0.9
4,176,151	+		Pf6N2E2_3584	0.72	+0.8
4,176,152	-		Pf6N2E2_3584	0.72	+0.3
4,176,152	-		Pf6N2E2_3584	0.72	-0.7
4,176,152	-		Pf6N2E2_3584	0.72	+0.3
4,176,152	-		Pf6N2E2_3584	0.72	+0.6
4,176,178	+		Pf6N2E2_3584	0.75	+0.1
4,176,178	+		Pf6N2E2_3584	0.75	+0.3
4,176,178	+		Pf6N2E2_3584	0.75	+0.3
4,176,178	+		Pf6N2E2_3584	0.75	+0.6
4,176,178	+		Pf6N2E2_3584	0.75	-0.7
4,176,178	+		Pf6N2E2_3584	0.75	-0.6
4,176,178	+		Pf6N2E2_3584	0.75	-0.4
4,176,178	+		Pf6N2E2_3584	0.75	-0.4
4,176,179	-		Pf6N2E2_3584	0.75	+1.2
4,176,179	-		Pf6N2E2_3584	0.75	-0.7
4,176,179	-		Pf6N2E2_3584	0.75	-0.6
4,176,179	-		Pf6N2E2_3584	0.75	-1.5
4,176,179	-		Pf6N2E2_3584	0.75	+1.5
4,176,179	-		Pf6N2E2_3584	0.75	+0.5
4,176,179	-		Pf6N2E2_3584	0.75	+0.5
4,176,179	-		Pf6N2E2_3584	0.75	-1.4
4,176,262	-		Pf6N2E2_3584	0.84	+0.1
4,176,307	+		Pf6N2E2_3584	0.89	-0.3
4,176,307	+		Pf6N2E2_3584	0.89	+0.8
4,176,308	-		Pf6N2E2_3584	0.89	+0.5
4,176,308	-		Pf6N2E2_3584	0.89	+0.4
4,176,308	-		Pf6N2E2_3584	0.89	+0.1
4,176,310	+		Pf6N2E2_3584	0.89	-3.0
4,176,310	+		Pf6N2E2_3584	0.89	+1.2
4,176,310	+		Pf6N2E2_3584	0.89	+0.0
4,176,310	+		Pf6N2E2_3584	0.89	-0.1
4,176,310	+		Pf6N2E2_3584	0.89	-1.1
4,176,311	-		Pf6N2E2_3584	0.89	-0.0
4,176,311	-		Pf6N2E2_3584	0.89	-1.2
4,176,311	-		Pf6N2E2_3584	0.89	+1.2
4,176,311	-		Pf6N2E2_3584	0.89	-0.9
4,176,311	-		Pf6N2E2_3584	0.89	+0.2
4,176,311	-		Pf6N2E2_3584	0.89	+0.8