Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07845 and BWI76_RS07850 are separated by 145 nucleotides BWI76_RS07850 and BWI76_RS07855 overlap by 4 nucleotides
BWI76_RS07845: BWI76_RS07845 - LacI family transcriptional regulator, at 1,664,015 to 1,665,004
_RS07845
BWI76_RS07850: BWI76_RS07850 - putative cytosine deaminase-related metal-dependent hydrolase, at 1,665,150 to 1,666,388
_RS07850
BWI76_RS07855: BWI76_RS07855 - PucR family transcriptional regulator, at 1,666,385 to 1,667,620
_RS07855
Position (kb)
1665
1666
1667 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1664.429 kb on - strand, within BWI76_RS07845 at 1664.872 kb on - strand, within BWI76_RS07845 at 1664.928 kb on - strand at 1665.026 kb on - strand at 1665.090 kb on + strand at 1665.183 kb on - strand at 1665.221 kb on - strand at 1665.250 kb on - strand at 1665.323 kb on + strand, within BWI76_RS07850 at 1665.432 kb on - strand, within BWI76_RS07850 at 1665.631 kb on - strand, within BWI76_RS07850 at 1665.681 kb on - strand, within BWI76_RS07850 at 1665.762 kb on + strand, within BWI76_RS07850 at 1665.921 kb on + strand, within BWI76_RS07850 at 1666.045 kb on + strand, within BWI76_RS07850 at 1666.548 kb on + strand, within BWI76_RS07855 at 1666.669 kb on + strand at 1667.291 kb on - strand, within BWI76_RS07855
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 1,664,429 - BWI76_RS07845 0.42 +0.8 1,664,872 - BWI76_RS07845 0.87 -0.6 1,664,928 - -0.5 1,665,026 - +0.1 1,665,090 + +1.8 1,665,183 - -1.0 1,665,221 - -1.3 1,665,250 - -0.8 1,665,323 + BWI76_RS07850 0.14 -2.0 1,665,432 - BWI76_RS07850 0.23 -1.5 1,665,631 - BWI76_RS07850 0.39 -2.2 1,665,681 - BWI76_RS07850 0.43 -1.5 1,665,762 + BWI76_RS07850 0.49 -0.3 1,665,921 + BWI76_RS07850 0.62 -1.1 1,666,045 + BWI76_RS07850 0.72 -0.8 1,666,548 + BWI76_RS07855 0.13 -1.1 1,666,669 + +0.7 1,667,291 - BWI76_RS07855 0.73 -0.4
Or see this region's nucleotide sequence