Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07850

Experiment: Cytosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07845 and BWI76_RS07850 are separated by 145 nucleotidesBWI76_RS07850 and BWI76_RS07855 overlap by 4 nucleotides BWI76_RS07845: BWI76_RS07845 - LacI family transcriptional regulator, at 1,664,015 to 1,665,004 _RS07845 BWI76_RS07850: BWI76_RS07850 - putative cytosine deaminase-related metal-dependent hydrolase, at 1,665,150 to 1,666,388 _RS07850 BWI76_RS07855: BWI76_RS07855 - PucR family transcriptional regulator, at 1,666,385 to 1,667,620 _RS07855 Position (kb) 1665 1666 1667Strain fitness (log2 ratio) -2 -1 0 1 2at 1664.429 kb on - strand, within BWI76_RS07845at 1664.872 kb on - strand, within BWI76_RS07845at 1664.928 kb on - strandat 1665.026 kb on - strandat 1665.090 kb on + strandat 1665.183 kb on - strandat 1665.221 kb on - strandat 1665.250 kb on - strandat 1665.323 kb on + strand, within BWI76_RS07850at 1665.432 kb on - strand, within BWI76_RS07850at 1665.631 kb on - strand, within BWI76_RS07850at 1665.681 kb on - strand, within BWI76_RS07850at 1665.762 kb on + strand, within BWI76_RS07850at 1665.921 kb on + strand, within BWI76_RS07850at 1666.045 kb on + strand, within BWI76_RS07850at 1666.548 kb on + strand, within BWI76_RS07855at 1666.669 kb on + strandat 1667.291 kb on - strand, within BWI76_RS07855

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytosine (N)
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1,664,429 - BWI76_RS07845 0.42 +0.8
1,664,872 - BWI76_RS07845 0.87 -0.6
1,664,928 - -0.5
1,665,026 - +0.1
1,665,090 + +1.8
1,665,183 - -1.0
1,665,221 - -1.3
1,665,250 - -0.8
1,665,323 + BWI76_RS07850 0.14 -2.0
1,665,432 - BWI76_RS07850 0.23 -1.5
1,665,631 - BWI76_RS07850 0.39 -2.2
1,665,681 - BWI76_RS07850 0.43 -1.5
1,665,762 + BWI76_RS07850 0.49 -0.3
1,665,921 + BWI76_RS07850 0.62 -1.1
1,666,045 + BWI76_RS07850 0.72 -0.8
1,666,548 + BWI76_RS07855 0.13 -1.1
1,666,669 + +0.7
1,667,291 - BWI76_RS07855 0.73 -0.4

Or see this region's nucleotide sequence