Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27885

Experiment: 4C survival; 672 hrs

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4C survival; 672 hrs
6,083,404	+		AO353_27880	0.43	+1.0
6,083,404	+		AO353_27880	0.43	+0.4
6,083,404	+		AO353_27880	0.43	-0.5
6,083,404	+		AO353_27880	0.43	+2.0
6,083,404	+		AO353_27880	0.43	+0.0
6,083,404	+		AO353_27880	0.43	-1.2
6,083,404	+		AO353_27880	0.43	-0.6
6,083,404	+		AO353_27880	0.43	-0.3
6,083,405	-		AO353_27880	0.43	+0.4
6,083,405	-		AO353_27880	0.43	-2.4
6,083,405	-				+0.4
6,083,405	-		AO353_27880	0.43	+0.2
6,083,405	-		AO353_27880	0.43	+0.8
6,083,542	+		AO353_27880	0.53	-0.6
6,083,542	+		AO353_27880	0.53	-0.7
6,083,542	+		AO353_27880	0.53	-1.3
6,083,542	+		AO353_27880	0.53	-0.6
6,083,542	+		AO353_27880	0.53	-1.8
6,083,543	-		AO353_27880	0.53	+2.0
6,083,630	-		AO353_27880	0.60	-0.2
6,083,650	+		AO353_27880	0.61	-0.6
6,083,650	+		AO353_27880	0.61	+0.6
6,083,650	+		AO353_27880	0.61	-2.2
6,083,650	+		AO353_27880	0.61	+0.1
6,083,651	-		AO353_27880	0.62	+0.4
6,083,651	-		AO353_27880	0.62	+0.7
6,083,651	-		AO353_27880	0.62	+0.3
6,083,656	+		AO353_27880	0.62	-0.8
6,083,656	+				+2.4
6,083,657	-		AO353_27880	0.62	+0.1
6,083,752	-		AO353_27880	0.69	+0.8
6,083,920	+		AO353_27880	0.82	-0.1
6,083,921	-		AO353_27880	0.82	+0.9
6,083,921	-		AO353_27880	0.82	+2.0
6,083,924	+		AO353_27880	0.82	+1.0
6,083,925	-		AO353_27880	0.82	+0.8
6,083,925	-		AO353_27880	0.82	+0.5
6,083,925	-		AO353_27880	0.82	+1.2
6,083,954	+		AO353_27880	0.84	-0.4
6,083,954	+		AO353_27880	0.84	+2.0
6,083,954	+		AO353_27880	0.84	-0.3
6,083,955	-		AO353_27880	0.84	+1.5
6,083,955	-		AO353_27880	0.84	+0.6
6,083,955	-		AO353_27880	0.84	+0.4
6,084,202	+				+0.1
6,084,202	+				+0.4
6,084,202	+				-0.6
6,084,203	-				+2.9
6,084,206	+				+0.2
6,084,206	+				-1.6
6,084,206	+				+0.0
6,084,206	+				+0.6
6,084,206	+				-0.8
6,084,206	+				-1.7
6,084,206	+				+0.1
6,084,206	+				-1.7
6,084,206	+				-0.1
6,084,206	+				-1.0
6,084,207	-				+2.3
6,084,207	-				+0.2
6,084,207	-				-0.8
6,084,207	-				-0.3
6,084,259	+		AO353_27885	0.11	-0.9
6,084,332	+		AO353_27885	0.20	-0.4
6,084,333	-		AO353_27885	0.21	+1.0
6,084,333	-		AO353_27885	0.21	+0.9
6,084,365	+		AO353_27885	0.25	+1.0
6,084,543	+		AO353_27885	0.48	-0.4
6,084,543	+		AO353_27885	0.48	+0.6
6,084,544	-		AO353_27885	0.48	-0.6
6,084,544	-		AO353_27885	0.48	+0.8
6,084,544	-				+1.0
6,084,544	-		AO353_27885	0.48	+0.6
6,084,544	-		AO353_27885	0.48	-0.5
6,084,544	-		AO353_27885	0.48	-0.4
6,084,544	-		AO353_27885	0.48	-1.5
6,084,593	+		AO353_27885	0.54	-0.7
6,084,593	+		AO353_27885	0.54	-0.8
6,084,593	+		AO353_27885	0.54	-2.0
6,084,593	+		AO353_27885	0.54	-0.6
6,084,593	+		AO353_27885	0.54	-0.4
6,084,594	-		AO353_27885	0.55	+1.3
6,084,594	-		AO353_27885	0.55	-1.0
6,084,594	-		AO353_27885	0.55	-0.2
6,084,713	+		AO353_27885	0.70	+1.5
6,084,714	-		AO353_27885	0.70	+1.0
6,084,714	-		AO353_27885	0.70	+1.2
6,084,780	+		AO353_27885	0.79	+2.7
6,084,780	+		AO353_27885	0.79	+1.9
6,084,780	+		AO353_27885	0.79	+1.8
6,084,780	+		AO353_27885	0.79	+2.3
6,084,781	-		AO353_27885	0.79	+0.3
6,084,782	+		AO353_27885	0.79	+1.0
6,084,782	+		AO353_27885	0.79	+2.3
6,084,782	+		AO353_27885	0.79	+1.8
6,084,782	+		AO353_27885	0.79	+2.3
6,084,782	+		AO353_27885	0.79	+2.0
6,084,782	+		AO353_27885	0.79	+1.2
6,084,782	+		AO353_27885	0.79	+1.9
6,084,782	+		AO353_27885	0.79	+2.0
6,084,783	-		AO353_27885	0.79	+0.8
6,084,783	-		AO353_27885	0.79	+1.1
6,084,783	-		AO353_27885	0.79	-1.2
6,084,783	-		AO353_27885	0.79	-0.5
6,084,783	-		AO353_27885	0.79	-1.0
6,084,783	-		AO353_27885	0.79	+1.3
6,084,783	-		AO353_27885	0.79	-1.6
6,084,896	+				+2.1
6,084,896	+				+3.3
6,084,897	-				+2.6
6,084,897	-				+0.2
6,084,897	-				+2.2
6,084,932	-				+1.4
6,084,932	-				-0.3
6,084,989	+				+4.1
6,084,990	-				+0.3
6,084,990	-				+0.8
6,085,011	-				+0.4
6,085,019	+				+3.2
6,085,019	+				+4.0
6,085,020	-				-0.8
6,085,020	-				-1.3
6,085,032	+				+3.9
6,085,032	+				+3.4
6,085,033	-				+0.0
6,085,033	-				-0.6
6,085,033	-				+0.1
6,085,088	+				+4.4
6,085,128	-				-1.3
6,085,128	-				-1.9
6,085,128	-				-1.7
6,085,132	+				+4.4
6,085,132	+				+1.7
6,085,133	-				-1.7
6,085,141	+				+3.6
6,085,142	-				-0.6
6,085,145	+				+3.6
6,085,146	-				-0.4
6,085,146	-				-1.9
6,085,154	-				-0.2
6,085,168	+				+3.0
6,085,268	+				+0.5
6,085,269	-				+1.0
6,085,391	-		AO353_27890	0.22	-1.7
6,085,391	-		AO353_27890	0.22	-0.7
6,085,501	+		AO353_27890	0.35	+2.5
6,085,590	+		AO353_27890	0.45	+0.2
6,085,590	+		AO353_27890	0.45	+0.9
6,085,745	+		AO353_27890	0.64	+4.1
6,085,745	+		AO353_27890	0.64	+4.6
6,085,745	+		AO353_27890	0.64	+5.3
6,085,745	+		AO353_27890	0.64	+6.8
6,085,746	-		AO353_27890	0.64	-0.3
6,085,746	-		AO353_27890	0.64	-1.0
6,085,746	-		AO353_27890	0.64	-0.6
6,085,746	-		AO353_27890	0.64	-2.4
6,085,746	-		AO353_27890	0.64	+0.4
6,085,771	+		AO353_27890	0.67	+8.1
6,085,842	+				+6.5
6,085,846	+		AO353_27890	0.75	+5.2
6,085,846	+		AO353_27890	0.75	+6.3
6,085,846	+		AO353_27890	0.75	+6.0
6,085,846	+				+4.2
6,085,846	+		AO353_27890	0.75	+6.3
6,085,846	+		AO353_27890	0.75	+5.9
6,085,846	+		AO353_27890	0.75	+6.0
6,085,847	-		AO353_27890	0.76	+1.4
6,085,847	-		AO353_27890	0.76	+0.4
6,085,847	-		AO353_27890	0.76	-1.2
6,085,847	-		AO353_27890	0.76	-0.3
6,085,847	-		AO353_27890	0.76	-1.3
6,085,847	-		AO353_27890	0.76	-0.0
6,085,896	-		AO353_27890	0.81	-0.6