Experiment: 4C survival; 672 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21600 and AO353_21605 are separated by 188 nucleotides AO353_21605 and AO353_21610 are separated by 408 nucleotides
AO353_21600: AO353_21600 - hypothetical protein, at 4,730,583 to 4,732,247
_21600
AO353_21605: AO353_21605 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, at 4,732,436 to 4,735,036
_21605
AO353_21610: AO353_21610 - Fe-S protein, at 4,735,445 to 4,735,915
_21610
Position (kb)
4732
4733
4734
4735
4736 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4731.505 kb on - strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.606 kb on + strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.607 kb on - strand, within AO353_21600 at 4731.608 kb on + strand, within AO353_21600 at 4731.608 kb on + strand, within AO353_21600 at 4731.608 kb on + strand, within AO353_21600 at 4731.609 kb on - strand, within AO353_21600 at 4731.693 kb on + strand, within AO353_21600 at 4731.751 kb on + strand, within AO353_21600 at 4732.233 kb on - strand at 4732.233 kb on - strand at 4732.245 kb on + strand at 4732.245 kb on + strand at 4732.245 kb on + strand at 4732.280 kb on + strand at 4732.281 kb on - strand at 4732.362 kb on - strand at 4732.389 kb on - strand at 4735.099 kb on - strand at 4735.356 kb on - strand at 4735.356 kb on - strand at 4735.361 kb on - strand at 4735.441 kb on - strand at 4735.874 kb on + strand at 4735.875 kb on - strand at 4735.875 kb on - strand at 4735.876 kb on + strand at 4735.876 kb on + strand at 4735.876 kb on + strand at 4735.877 kb on - strand at 4735.877 kb on - strand at 4735.954 kb on + strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.955 kb on - strand at 4735.958 kb on + strand at 4735.958 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 672 hrs remove 4,731,505 - AO353_21600 0.55 +0.4 4,731,606 + AO353_21600 0.61 +1.4 4,731,606 + AO353_21600 0.61 -1.3 4,731,606 + AO353_21600 0.61 -0.7 4,731,606 + AO353_21600 0.61 +0.2 4,731,607 - AO353_21600 0.62 +0.3 4,731,607 - AO353_21600 0.62 -1.8 4,731,607 - AO353_21600 0.62 -0.8 4,731,607 - AO353_21600 0.62 -1.4 4,731,607 - AO353_21600 0.62 -0.4 4,731,608 + AO353_21600 0.62 +0.5 4,731,608 + AO353_21600 0.62 +0.6 4,731,608 + AO353_21600 0.62 -0.3 4,731,609 - AO353_21600 0.62 -1.1 4,731,693 + AO353_21600 0.67 -1.0 4,731,751 + AO353_21600 0.70 -0.8 4,732,233 - -0.2 4,732,233 - -0.8 4,732,245 + -1.5 4,732,245 + +0.4 4,732,245 + +0.3 4,732,280 + -0.7 4,732,281 - +0.9 4,732,362 - -1.0 4,732,389 - +1.0 4,735,099 - +3.0 4,735,356 - -0.2 4,735,356 - +1.0 4,735,361 - -1.8 4,735,441 - +0.8 4,735,874 + +1.0 4,735,875 - -1.7 4,735,875 - -0.1 4,735,876 + +1.6 4,735,876 + +0.8 4,735,876 + +0.5 4,735,877 - +2.6 4,735,877 - +0.4 4,735,954 + +0.9 4,735,955 - +0.0 4,735,955 - -1.9 4,735,955 - +0.0 4,735,955 - +0.0 4,735,955 - -1.4 4,735,955 - -0.3 4,735,955 - -0.3 4,735,955 - +0.0 4,735,955 - +0.0 4,735,958 + -0.9 4,735,958 + -0.6
Or see this region's nucleotide sequence