Experiment: 4C survival; 672 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16320 and AO353_16325 are separated by 281 nucleotides AO353_16325 and AO353_16330 overlap by 1 nucleotides AO353_16330 and AO353_16335 are separated by 32 nucleotides
AO353_16320: AO353_16320 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 3,623,638 to 3,624,312
_16320
AO353_16325: AO353_16325 - hypothetical protein, at 3,624,594 to 3,624,902
_16325
AO353_16330: AO353_16330 - hypothetical protein, at 3,624,902 to 3,625,762
_16330
AO353_16335: AO353_16335 - 2-methylisocitrate lyase, at 3,625,795 to 3,626,616
_16335
Position (kb)
3624
3625 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8 at 3623.596 kb on + strand at 3623.596 kb on + strand at 3623.597 kb on - strand at 3623.597 kb on - strand at 3623.597 kb on - strand at 3623.597 kb on - strand at 3623.597 kb on - strand at 3623.597 kb on - strand at 3623.597 kb on - strand at 3624.275 kb on - strand at 3624.397 kb on + strand at 3624.397 kb on + strand at 3624.398 kb on - strand at 3624.410 kb on - strand at 3624.495 kb on + strand at 3624.520 kb on + strand at 3624.520 kb on + strand at 3624.520 kb on + strand at 3624.520 kb on + strand at 3624.520 kb on + strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.521 kb on - strand at 3624.524 kb on + strand at 3624.524 kb on + strand at 3624.525 kb on - strand at 3624.525 kb on - strand at 3624.589 kb on + strand at 3624.589 kb on + strand at 3624.589 kb on + strand at 3624.589 kb on + strand at 3624.589 kb on + strand at 3624.589 kb on + strand at 3624.589 kb on + strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.590 kb on - strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.593 kb on + strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.594 kb on - strand at 3624.601 kb on + strand at 3624.602 kb on - strand at 3624.602 kb on - strand at 3624.624 kb on + strand at 3624.792 kb on + strand, within AO353_16325 at 3624.792 kb on + strand, within AO353_16325 at 3624.792 kb on + strand, within AO353_16325 at 3624.792 kb on + strand, within AO353_16325 at 3624.792 kb on + strand, within AO353_16325 at 3624.792 kb on + strand, within AO353_16325 at 3624.793 kb on - strand, within AO353_16325 at 3624.793 kb on - strand, within AO353_16325 at 3624.793 kb on - strand, within AO353_16325 at 3624.793 kb on - strand, within AO353_16325 at 3624.793 kb on - strand, within AO353_16325 at 3624.793 kb on - strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.837 kb on + strand, within AO353_16325 at 3624.838 kb on - strand, within AO353_16325 at 3624.914 kb on + strand at 3624.914 kb on + strand at 3624.915 kb on - strand at 3624.915 kb on - strand at 3624.915 kb on - strand at 3624.915 kb on - strand at 3624.915 kb on - strand at 3624.915 kb on - strand at 3624.917 kb on + strand at 3624.917 kb on + strand at 3624.917 kb on + strand at 3624.917 kb on + strand at 3624.917 kb on + strand at 3624.918 kb on - strand at 3624.918 kb on - strand at 3624.918 kb on - strand at 3624.918 kb on - strand at 3624.918 kb on - strand at 3624.918 kb on - strand at 3624.919 kb on - strand at 3624.959 kb on + strand at 3624.959 kb on + strand at 3624.960 kb on - strand at 3624.966 kb on - strand at 3625.004 kb on + strand, within AO353_16330 at 3625.004 kb on + strand, within AO353_16330 at 3625.005 kb on - strand, within AO353_16330 at 3625.046 kb on + strand, within AO353_16330 at 3625.046 kb on + strand, within AO353_16330 at 3625.046 kb on + strand, within AO353_16330 at 3625.046 kb on + strand, within AO353_16330 at 3625.046 kb on + strand, within AO353_16330 at 3625.046 kb on + strand, within AO353_16330 at 3625.047 kb on - strand, within AO353_16330 at 3625.047 kb on - strand, within AO353_16330 at 3625.282 kb on + strand, within AO353_16330 at 3625.283 kb on - strand, within AO353_16330 at 3625.502 kb on - strand, within AO353_16330 at 3625.502 kb on - strand, within AO353_16330 at 3625.502 kb on - strand, within AO353_16330 at 3625.502 kb on - strand, within AO353_16330 at 3625.555 kb on + strand, within AO353_16330 at 3625.555 kb on + strand, within AO353_16330 at 3625.555 kb on + strand, within AO353_16330 at 3625.556 kb on - strand, within AO353_16330 at 3625.556 kb on - strand, within AO353_16330 at 3625.556 kb on - strand, within AO353_16330 at 3625.556 kb on - strand, within AO353_16330 at 3625.556 kb on - strand, within AO353_16330 at 3625.556 kb on - strand, within AO353_16330 at 3625.556 kb on - strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.616 kb on + strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.617 kb on - strand, within AO353_16330 at 3625.618 kb on + strand, within AO353_16330 at 3625.618 kb on + strand, within AO353_16330 at 3625.618 kb on + strand, within AO353_16330 at 3625.618 kb on + strand, within AO353_16330 at 3625.618 kb on + strand, within AO353_16330 at 3625.619 kb on - strand, within AO353_16330 at 3625.619 kb on - strand, within AO353_16330 at 3625.619 kb on - strand, within AO353_16330 at 3625.619 kb on - strand, within AO353_16330 at 3625.619 kb on - strand, within AO353_16330 at 3625.619 kb on - strand, within AO353_16330 at 3625.675 kb on + strand, within AO353_16330 at 3625.676 kb on - strand, within AO353_16330 at 3625.676 kb on - strand, within AO353_16330 at 3625.722 kb on + strand at 3625.722 kb on + strand at 3625.722 kb on + strand at 3625.722 kb on + strand at 3625.722 kb on + strand at 3625.722 kb on + strand at 3625.722 kb on + strand at 3625.722 kb on + strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.723 kb on - strand at 3625.724 kb on + strand at 3625.724 kb on + strand at 3625.724 kb on + strand at 3625.724 kb on + strand at 3625.724 kb on + strand at 3625.725 kb on - strand at 3625.725 kb on - strand at 3625.725 kb on - strand at 3625.725 kb on - strand at 3625.725 kb on - strand at 3625.725 kb on - strand at 3625.725 kb on - strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.726 kb on + strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.727 kb on - strand at 3625.812 kb on + strand at 3625.835 kb on + strand at 3625.836 kb on - strand at 3625.836 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 672 hrs remove 3,623,596 + -0.1 3,623,596 + +0.8 3,623,597 - -0.8 3,623,597 - -1.0 3,623,597 - +0.9 3,623,597 - -0.5 3,623,597 - -0.3 3,623,597 - +0.5 3,623,597 - +0.9 3,624,275 - +0.2 3,624,397 + +0.9 3,624,397 + -1.6 3,624,398 - +1.2 3,624,410 - -0.3 3,624,495 + -1.2 3,624,520 + -1.2 3,624,520 + -1.7 3,624,520 + -0.7 3,624,520 + -2.1 3,624,520 + -1.6 3,624,521 - +0.9 3,624,521 - -0.3 3,624,521 - +0.9 3,624,521 - +1.2 3,624,521 - +0.6 3,624,521 - +0.9 3,624,521 - -1.2 3,624,521 - +0.5 3,624,521 - +8.3 3,624,521 - +1.3 3,624,521 - +0.7 3,624,524 + -0.1 3,624,524 + -1.0 3,624,525 - +1.2 3,624,525 - +1.1 3,624,589 + +0.1 3,624,589 + +0.2 3,624,589 + -0.4 3,624,589 + -0.7 3,624,589 + +0.7 3,624,589 + +1.5 3,624,589 + -0.5 3,624,590 - +1.6 3,624,590 - -0.9 3,624,590 - +0.8 3,624,590 - +0.2 3,624,590 - +2.3 3,624,590 - +2.0 3,624,590 - +2.0 3,624,590 - +0.4 3,624,590 - -1.0 3,624,590 - -0.8 3,624,590 - +0.2 3,624,593 + +0.7 3,624,593 + +0.6 3,624,593 + +0.4 3,624,593 + +0.8 3,624,593 + +1.2 3,624,593 + -1.5 3,624,593 + +0.4 3,624,593 + -1.1 3,624,593 + +0.2 3,624,593 + +0.7 3,624,593 + +0.5 3,624,593 + -0.3 3,624,593 + -0.6 3,624,594 - +1.3 3,624,594 - +1.5 3,624,594 - +2.5 3,624,594 - +0.4 3,624,594 - +1.0 3,624,594 - +0.4 3,624,594 - -0.5 3,624,594 - -0.1 3,624,594 - +1.9 3,624,594 - +0.2 3,624,601 + +1.0 3,624,602 - -1.2 3,624,602 - +1.0 3,624,624 + +2.2 3,624,792 + AO353_16325 0.64 +1.2 3,624,792 + AO353_16325 0.64 +1.3 3,624,792 + AO353_16325 0.64 +1.0 3,624,792 + AO353_16325 0.64 +0.8 3,624,792 + AO353_16325 0.64 -0.7 3,624,792 + AO353_16325 0.64 +1.2 3,624,793 - AO353_16325 0.64 +1.5 3,624,793 - AO353_16325 0.64 +1.2 3,624,793 - AO353_16325 0.64 +1.7 3,624,793 - AO353_16325 0.64 +0.2 3,624,793 - AO353_16325 0.64 +0.7 3,624,793 - AO353_16325 0.64 +1.7 3,624,837 + AO353_16325 0.79 -0.3 3,624,837 + AO353_16325 0.79 +0.8 3,624,837 + AO353_16325 0.79 -0.3 3,624,837 + AO353_16325 0.79 +0.4 3,624,837 + AO353_16325 0.79 +1.0 3,624,837 + AO353_16325 0.79 +0.3 3,624,837 + AO353_16325 0.79 +0.6 3,624,837 + AO353_16325 0.79 +1.3 3,624,838 - AO353_16325 0.79 +0.1 3,624,914 + -0.1 3,624,914 + +0.8 3,624,915 - +0.1 3,624,915 - -2.2 3,624,915 - +0.7 3,624,915 - +1.5 3,624,915 - +1.0 3,624,915 - +0.3 3,624,917 + -0.2 3,624,917 + -1.6 3,624,917 + -0.8 3,624,917 + -0.2 3,624,917 + +0.5 3,624,918 - -0.4 3,624,918 - +1.1 3,624,918 - +0.9 3,624,918 - +0.2 3,624,918 - -0.8 3,624,918 - +0.4 3,624,919 - -0.2 3,624,959 + +0.2 3,624,959 + -0.1 3,624,960 - +0.8 3,624,966 - -0.5 3,625,004 + AO353_16330 0.12 +0.5 3,625,004 + AO353_16330 0.12 +1.5 3,625,005 - AO353_16330 0.12 +0.4 3,625,046 + AO353_16330 0.17 +0.3 3,625,046 + AO353_16330 0.17 +2.2 3,625,046 + AO353_16330 0.17 +0.4 3,625,046 + AO353_16330 0.17 +0.2 3,625,046 + AO353_16330 0.17 +0.2 3,625,046 + AO353_16330 0.17 +0.7 3,625,047 - AO353_16330 0.17 +1.1 3,625,047 - AO353_16330 0.17 +0.0 3,625,282 + AO353_16330 0.44 -0.1 3,625,283 - AO353_16330 0.44 +0.1 3,625,502 - AO353_16330 0.70 +1.4 3,625,502 - AO353_16330 0.70 +0.2 3,625,502 - AO353_16330 0.70 +0.5 3,625,502 - AO353_16330 0.70 -1.0 3,625,555 + AO353_16330 0.76 -0.6 3,625,555 + AO353_16330 0.76 -0.3 3,625,555 + AO353_16330 0.76 +0.1 3,625,556 - AO353_16330 0.76 -0.3 3,625,556 - AO353_16330 0.76 -0.6 3,625,556 - AO353_16330 0.76 -1.1 3,625,556 - AO353_16330 0.76 +0.4 3,625,556 - AO353_16330 0.76 -0.1 3,625,556 - AO353_16330 0.76 -0.3 3,625,556 - AO353_16330 0.76 -0.4 3,625,616 + AO353_16330 0.83 +0.0 3,625,616 + AO353_16330 0.83 -1.1 3,625,616 + AO353_16330 0.83 +1.3 3,625,616 + AO353_16330 0.83 -0.3 3,625,616 + AO353_16330 0.83 +0.0 3,625,616 + AO353_16330 0.83 +0.6 3,625,616 + AO353_16330 0.83 +1.2 3,625,616 + AO353_16330 0.83 -2.0 3,625,616 + AO353_16330 0.83 -0.6 3,625,616 + AO353_16330 0.83 -0.8 3,625,616 + AO353_16330 0.83 +0.7 3,625,617 - AO353_16330 0.83 -0.7 3,625,617 - AO353_16330 0.83 -1.3 3,625,617 - AO353_16330 0.83 +0.3 3,625,617 - AO353_16330 0.83 +0.2 3,625,617 - AO353_16330 0.83 -0.7 3,625,617 - AO353_16330 0.83 +0.5 3,625,617 - AO353_16330 0.83 +0.3 3,625,617 - AO353_16330 0.83 +0.5 3,625,617 - AO353_16330 0.83 -0.1 3,625,618 + AO353_16330 0.83 -0.3 3,625,618 + AO353_16330 0.83 -0.9 3,625,618 + AO353_16330 0.83 -0.7 3,625,618 + AO353_16330 0.83 -0.1 3,625,618 + AO353_16330 0.83 -1.0 3,625,619 - AO353_16330 0.83 -1.4 3,625,619 - AO353_16330 0.83 -1.6 3,625,619 - AO353_16330 0.83 -1.4 3,625,619 - AO353_16330 0.83 -0.2 3,625,619 - AO353_16330 0.83 +2.1 3,625,619 - AO353_16330 0.83 -0.8 3,625,675 + AO353_16330 0.90 -1.3 3,625,676 - AO353_16330 0.90 +7.7 3,625,676 - AO353_16330 0.90 +1.0 3,625,722 + -1.6 3,625,722 + +0.1 3,625,722 + -0.4 3,625,722 + -1.3 3,625,722 + -0.9 3,625,722 + +0.5 3,625,722 + -0.6 3,625,722 + +0.9 3,625,723 - +0.8 3,625,723 - -0.4 3,625,723 - +1.7 3,625,723 - +0.7 3,625,723 - -1.0 3,625,723 - +1.2 3,625,723 - +0.2 3,625,723 - +0.2 3,625,723 - +1.2 3,625,724 + -1.4 3,625,724 + +1.3 3,625,724 + +1.1 3,625,724 + +0.5 3,625,724 + -0.2 3,625,725 - +1.7 3,625,725 - -0.6 3,625,725 - -1.1 3,625,725 - +1.0 3,625,725 - +0.7 3,625,725 - +2.5 3,625,725 - +0.7 3,625,726 + +0.7 3,625,726 + -1.5 3,625,726 + +0.4 3,625,726 + +0.3 3,625,726 + -0.3 3,625,726 + +0.2 3,625,726 + -0.5 3,625,726 + +1.7 3,625,726 + -1.4 3,625,726 + +0.4 3,625,726 + +0.2 3,625,726 + -0.2 3,625,726 + +0.4 3,625,726 + -0.7 3,625,726 + +0.3 3,625,726 + -1.6 3,625,726 + -1.6 3,625,726 + -0.4 3,625,727 - -1.6 3,625,727 - -1.3 3,625,727 - +0.3 3,625,727 - -0.5 3,625,727 - +0.7 3,625,727 - -1.6 3,625,727 - -0.4 3,625,727 - -0.6 3,625,727 - +0.0 3,625,727 - -1.2 3,625,727 - +0.7 3,625,727 - +0.2 3,625,727 - +0.5 3,625,727 - +0.5 3,625,727 - -1.0 3,625,727 - +0.7 3,625,727 - -0.3 3,625,727 - -0.4 3,625,727 - +0.8 3,625,727 - -1.5 3,625,812 + -2.6 3,625,835 + -0.0 3,625,836 - -0.8 3,625,836 - +1.3
Or see this region's nucleotide sequence