Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13940

Experiment: 4C survival; 672 hrs

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4C survival; 672 hrs
3,095,017	+		AO353_13935	0.57	+1.2
3,095,017	+		AO353_13935	0.57	-1.0
3,095,018	-		AO353_13935	0.58	+0.7
3,095,018	-		AO353_13935	0.58	+1.3
3,095,018	-		AO353_13935	0.58	-0.9
3,095,038	+		AO353_13935	0.59	+0.5
3,095,038	+		AO353_13935	0.59	+0.1
3,095,039	-		AO353_13935	0.59	-0.8
3,095,039	-		AO353_13935	0.59	+0.1
3,095,039	-		AO353_13935	0.59	-0.3
3,095,039	-		AO353_13935	0.59	+0.2
3,095,039	-		AO353_13935	0.59	-0.0
3,095,062	+		AO353_13935	0.61	-0.5
3,095,062	+		AO353_13935	0.61	+0.7
3,095,062	+		AO353_13935	0.61	+0.6
3,095,062	+		AO353_13935	0.61	+0.5
3,095,062	+		AO353_13935	0.61	-0.5
3,095,062	+		AO353_13935	0.61	+0.5
3,095,062	+		AO353_13935	0.61	+1.1
3,095,062	+		AO353_13935	0.61	-0.4
3,095,062	+		AO353_13935	0.61	-0.4
3,095,063	-		AO353_13935	0.61	-2.1
3,095,063	-		AO353_13935	0.61	-1.3
3,095,063	-		AO353_13935	0.61	+0.5
3,095,063	-		AO353_13935	0.61	-0.5
3,095,063	-		AO353_13935	0.61	-2.1
3,095,063	-		AO353_13935	0.61	-2.1
3,095,063	-		AO353_13935	0.61	+8.2
3,095,063	-		AO353_13935	0.61	-1.1
3,095,169	+		AO353_13935	0.69	-0.4
3,095,169	+		AO353_13935	0.69	+2.1
3,095,170	-		AO353_13935	0.69	+0.4
3,095,170	-		AO353_13935	0.69	-1.1
3,095,170	-		AO353_13935	0.69	-1.0
3,095,336	-		AO353_13935	0.83	+0.1
3,095,336	-		AO353_13935	0.83	-0.5
3,095,336	-		AO353_13935	0.83	-0.6
3,095,437	+				-2.5
3,095,437	+				-0.9
3,095,438	-				+1.5
3,095,566	+				-0.9
3,095,593	+				-0.4
3,095,593	+				+0.9
3,095,594	-				-1.4
3,095,635	-				-0.1
3,095,635	-				-3.3
3,095,635	-				-1.1
3,095,638	+				-0.4
3,095,638	+				-0.3
3,095,638	+				-2.2
3,095,639	-				-1.9
3,095,642	+				+2.6
3,095,642	+				-0.8
3,095,643	-				-0.5
3,095,643	-				-0.2
3,095,643	-				-2.9
3,095,650	+				-1.3
3,095,650	+				+0.6
3,095,650	+				-1.4
3,095,650	+				+1.6
3,095,651	-				-0.9
3,095,651	-				-0.0
3,095,651	-				-0.2
3,095,651	-				-0.4
3,095,766	-				-1.6
3,095,857	-				-0.5
3,095,934	+				+0.6
3,095,934	+				+0.0
3,095,935	-				-1.2
3,095,935	-				-2.3
3,095,935	-				+1.0
3,095,937	+				-0.4
3,095,937	+				-0.1
3,095,938	-				+0.0
3,095,956	+				-1.9
3,095,956	+				-1.8
3,095,956	+				-1.5
3,095,956	+				-1.1
3,095,956	+				-0.5
3,095,956	+				-0.8
3,095,956	+				-2.0
3,095,956	+				-1.5
3,095,956	+				-1.3
3,095,956	+				-1.4
3,095,956	+				-1.6
3,095,956	+				-0.7
3,095,956	+				-0.5
3,095,956	+				-1.2
3,095,956	+				-2.2
3,095,956	+				-0.4
3,095,957	-				-0.5
3,095,957	-				-2.1
3,095,957	-				-0.7
3,095,957	-				-0.7
3,095,957	-				-1.8
3,095,957	-				-1.0
3,095,957	-				-1.9
3,095,957	-				-1.2
3,095,957	-				-0.4
3,095,957	-				-2.2
3,095,957	-				+0.3
3,095,957	-				-1.4
3,095,957	-				-1.9
3,096,057	-				-0.4
3,096,057	-				-1.8
3,096,057	-				-2.0
3,096,057	-				-0.2
3,096,100	+				-1.8
3,096,100	+				-1.1
3,096,100	+				+1.6
3,096,101	-		AO353_13940	0.10	-0.5
3,096,104	+		AO353_13940	0.10	-0.1
3,096,105	-		AO353_13940	0.10	-0.7
3,096,105	-		AO353_13940	0.10	-3.0
3,096,105	-		AO353_13940	0.10	-1.7
3,096,105	-		AO353_13940	0.10	-3.8
3,096,105	-		AO353_13940	0.10	-1.5
3,096,185	+		AO353_13940	0.16	-1.9
3,096,254	+		AO353_13940	0.21	-0.7
3,096,254	+		AO353_13940	0.21	-1.4
3,096,254	+		AO353_13940	0.21	-2.3
3,096,254	+		AO353_13940	0.21	-1.5
3,096,254	+		AO353_13940	0.21	-1.0
3,096,254	+		AO353_13940	0.21	+0.6
3,096,254	+		AO353_13940	0.21	-1.0
3,096,255	-		AO353_13940	0.21	-1.7
3,096,255	-		AO353_13940	0.21	-2.1
3,096,255	-		AO353_13940	0.21	-0.8
3,096,255	-		AO353_13940	0.21	-2.0
3,096,817	-		AO353_13940	0.60	-2.3
3,097,014	-		AO353_13940	0.74	-1.8
3,097,034	+		AO353_13940	0.75	-1.4
3,097,034	+		AO353_13940	0.75	-0.4
3,097,035	-		AO353_13940	0.75	-1.2
3,097,035	-		AO353_13940	0.75	-0.5
3,097,124	+		AO353_13940	0.81	-1.3
3,097,208	+		AO353_13940	0.87	-0.2
3,097,208	+		AO353_13940	0.87	-1.5
3,097,208	+		AO353_13940	0.87	-1.3
3,097,209	-		AO353_13940	0.87	-0.5
3,097,209	-		AO353_13940	0.87	-0.7
3,097,209	-		AO353_13940	0.87	-0.2
3,097,209	-		AO353_13940	0.87	-0.7
3,097,209	-		AO353_13940	0.87	-1.7
3,097,238	+		AO353_13940	0.89	-0.2
3,097,238	+		AO353_13940	0.89	+0.0
3,097,318	+				-2.0
3,097,318	+				-1.7
3,097,318	+				+0.3
3,097,454	+				-1.8
3,097,455	-				-0.7
3,097,455	-				+1.6
3,097,455	-				-0.2
3,097,455	-				-2.3
3,097,455	-				-2.4
3,097,623	-		AO353_13945	0.22	-1.2
3,097,623	-		AO353_13945	0.22	-1.6
3,097,646	+		AO353_13945	0.25	+0.6
3,097,646	+		AO353_13945	0.25	-0.5
3,097,646	+		AO353_13945	0.25	+0.1
3,097,908	-		AO353_13945	0.51	-1.3
3,098,026	+		AO353_13945	0.62	-1.3
3,098,026	+		AO353_13945	0.62	-0.8
3,098,129	+		AO353_13945	0.73	-1.1
3,098,129	+		AO353_13945	0.73	-0.7
3,098,129	+		AO353_13945	0.73	-0.5
3,098,129	+		AO353_13945	0.73	+0.0
3,098,130	-		AO353_13945	0.73	-1.5
3,098,130	-		AO353_13945	0.73	-2.1
3,098,130	-		AO353_13945	0.73	-1.3
3,098,130	-		AO353_13945	0.73	+0.6
3,098,130	-		AO353_13945	0.73	-2.3
3,098,130	-		AO353_13945	0.73	-1.1
3,098,130	-		AO353_13945	0.73	-1.1
3,098,165	+		AO353_13945	0.76	-0.4
3,098,165	+		AO353_13945	0.76	+0.6
3,098,165	+		AO353_13945	0.76	-2.0
3,098,165	+		AO353_13945	0.76	-0.7
3,098,165	+		AO353_13945	0.76	-0.5
3,098,165	+		AO353_13945	0.76	-1.5
3,098,166	-		AO353_13945	0.76	-1.4
3,098,166	-		AO353_13945	0.76	-1.7
3,098,166	-		AO353_13945	0.76	-2.0
3,098,357	+				+2.6
3,098,357	+				+1.2
3,098,357	+				-0.7
3,098,357	+				-1.0
3,098,358	-				-2.5
3,098,358	-				-1.5
3,098,358	-				-1.6
3,098,358	-				-0.2
3,098,358	-				-1.3
3,098,358	-				-0.5
3,098,360	+				+1.2
3,098,360	+				-2.5
3,098,360	+				-0.7
3,098,360	+				-1.9
3,098,361	-				-1.6
3,098,361	-				-2.5
3,098,361	-				-1.0
3,098,361	-				-1.5
3,098,361	-				-1.9
3,098,361	-				-1.4