Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05785

Experiment: 4C survival; 672 hrs

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4C survival; 672 hrs
1,278,172	+		AO353_05780	0.42	+2.9
1,278,172	+		AO353_05780	0.42	+2.0
1,278,172	+		AO353_05780	0.42	+3.4
1,278,172	+		AO353_05780	0.42	+0.5
1,278,172	+		AO353_05780	0.42	+2.6
1,278,172	+		AO353_05780	0.42	+3.7
1,278,172	+		AO353_05780	0.42	+2.1
1,278,172	+		AO353_05780	0.42	+2.6
1,278,173	-		AO353_05780	0.42	+3.4
1,278,173	-		AO353_05780	0.42	+4.1
1,278,173	-		AO353_05780	0.42	+3.3
1,278,173	-		AO353_05780	0.42	+3.1
1,278,229	+		AO353_05780	0.46	+1.7
1,278,229	+		AO353_05780	0.46	+3.1
1,278,229	+		AO353_05780	0.46	+1.3
1,278,229	+		AO353_05780	0.46	+1.9
1,278,230	-		AO353_05780	0.46	+2.7
1,278,230	-		AO353_05780	0.46	+3.6
1,278,230	-		AO353_05780	0.46	+2.7
1,278,230	-		AO353_05780	0.46	+2.9
1,278,247	+		AO353_05780	0.47	+1.7
1,278,247	+		AO353_05780	0.47	+1.2
1,278,248	-		AO353_05780	0.47	+3.0
1,278,277	+		AO353_05780	0.49	+3.3
1,278,341	+		AO353_05780	0.53	+1.7
1,278,342	-		AO353_05780	0.53	+2.7
1,278,434	+		AO353_05780	0.59	+1.2
1,278,435	-		AO353_05780	0.59	+3.1
1,278,435	-		AO353_05780	0.59	+2.9
1,278,435	-		AO353_05780	0.59	+3.3
1,278,442	+		AO353_05780	0.60	+2.7
1,278,443	-		AO353_05780	0.60	+2.6
1,278,443	-		AO353_05780	0.60	+3.5
1,278,475	+		AO353_05780	0.62	+1.6
1,278,475	+		AO353_05780	0.62	+1.5
1,278,476	-		AO353_05780	0.62	+2.8
1,278,476	-		AO353_05780	0.62	+2.6
1,278,595	+		AO353_05780	0.70	+1.0
1,278,595	+		AO353_05780	0.70	+1.6
1,278,595	+		AO353_05780	0.70	+3.6
1,278,595	+		AO353_05780	0.70	+1.8
1,278,595	+		AO353_05780	0.70	+2.0
1,278,595	+		AO353_05780	0.70	+1.5
1,278,595	+		AO353_05780	0.70	+2.4
1,278,596	-		AO353_05780	0.70	+3.2
1,278,596	-		AO353_05780	0.70	+2.8
1,278,596	-		AO353_05780	0.70	+2.4
1,278,651	+		AO353_05780	0.73	+2.3
1,278,651	+		AO353_05780	0.73	+1.8
1,278,651	+		AO353_05780	0.73	+1.7
1,278,651	+		AO353_05780	0.73	+1.9
1,278,651	+		AO353_05780	0.73	+2.4
1,278,651	+		AO353_05780	0.73	+1.8
1,278,652	-		AO353_05780	0.73	+3.0
1,278,652	-		AO353_05780	0.73	+3.5
1,278,652	-		AO353_05780	0.73	+2.9
1,278,652	-		AO353_05780	0.73	+2.7
1,278,850	+		AO353_05780	0.86	+3.0
1,278,850	+		AO353_05780	0.86	-1.4
1,278,850	+		AO353_05780	0.86	+2.6
1,278,850	+		AO353_05780	0.86	+1.8
1,278,851	-		AO353_05780	0.86	+1.3
1,278,851	-		AO353_05780	0.86	+3.0
1,278,851	-		AO353_05780	0.86	+2.3
1,278,865	+		AO353_05780	0.87	+1.5
1,278,865	+		AO353_05780	0.87	+1.5
1,278,866	-		AO353_05780	0.87	+2.4
1,278,927	+				-0.3
1,278,927	+				+2.0
1,278,927	+				+0.5
1,278,927	+				+2.0
1,278,927	+				+0.7
1,278,927	+				+2.9
1,278,927	+				+2.8
1,278,927	+				+1.3
1,278,928	-				+2.8
1,278,928	-				+1.3
1,278,928	-				+2.7
1,278,929	+				+0.8
1,278,929	+				+2.0
1,278,929	+				+1.0
1,278,929	+				+2.2
1,278,929	+				+1.9
1,278,929	+				+1.7
1,278,929	+				+2.9
1,278,929	+				+2.1
1,278,929	+				+0.3
1,278,929	+				+1.6
1,278,930	-				+2.6
1,278,930	-				+2.0
1,278,930	-				+2.8
1,278,930	-				+1.8
1,278,930	-				+2.7
1,278,930	-				+2.7
1,278,973	+				+1.4
1,278,973	+				+1.0
1,278,974	-				+0.5
1,278,974	-				+1.9
1,279,049	+				+1.1
1,279,049	+				+2.1
1,279,049	+				+0.0
1,279,049	+				+1.2
1,279,050	-				+2.3
1,279,050	-				+2.6
1,279,050	-				+1.4
1,279,050	-				+2.6
1,279,055	+				+0.8
1,279,055	+				+0.9
1,279,055	+				+0.5
1,279,055	+				+0.2
1,279,055	+				+1.5
1,279,055	+				+1.3
1,279,056	-				+1.8
1,279,056	-				+2.9
1,279,056	-				+1.9
1,279,095	+				+0.8
1,279,095	+				+0.0
1,279,095	+				-0.4
1,279,095	+				-0.9
1,279,095	+				-1.1
1,279,095	+				+0.0
1,279,095	+				-0.6
1,279,095	+				-1.0
1,279,095	+				+0.1
1,279,095	+				+0.3
1,279,096	-				-1.6
1,279,096	-				-0.7
1,279,096	-				-1.4
1,279,096	-				-1.4
1,279,096	-				+0.4
1,279,096	-				-0.8
1,279,096	-				-1.3
1,279,096	-				+0.4
1,279,096	-				-0.0
1,279,096	-				-1.5
1,279,096	-				-0.4
1,279,096	-				-0.1
1,279,096	-				-1.3
1,279,096	-				-0.1
1,279,096	-				-1.8
1,279,096	-				+0.5
1,279,096	-				-0.3
1,279,096	-				-1.8
1,279,347	+		AO353_05785	0.24	+0.9
1,279,347	+		AO353_05785	0.24	+2.6
1,279,347	+		AO353_05785	0.24	-1.4
1,279,347	+		AO353_05785	0.24	-0.1
1,279,347	+		AO353_05785	0.24	-0.2
1,279,347	+		AO353_05785	0.24	-1.8
1,279,347	+		AO353_05785	0.24	-0.8
1,279,347	+		AO353_05785	0.24	-2.2
1,279,347	+		AO353_05785	0.24	+0.6
1,279,347	+		AO353_05785	0.24	-0.9
1,279,348	-		AO353_05785	0.24	-0.4
1,279,348	-		AO353_05785	0.24	-1.3
1,279,348	-		AO353_05785	0.24	+0.7
1,279,348	-		AO353_05785	0.24	+2.2
1,279,348	-		AO353_05785	0.24	+1.6
1,279,348	-		AO353_05785	0.24	+1.0
1,279,348	-		AO353_05785	0.24	+1.2
1,279,348	-		AO353_05785	0.24	-1.5
1,279,348	-		AO353_05785	0.24	-1.3
1,279,348	-		AO353_05785	0.24	-0.1
1,279,526	+		AO353_05785	0.39	-1.5
1,279,526	+		AO353_05785	0.39	-1.5
1,279,526	+		AO353_05785	0.39	-0.6
1,279,527	-		AO353_05785	0.39	+0.6
1,279,527	-		AO353_05785	0.39	+2.0
1,279,527	-		AO353_05785	0.39	+0.1
1,279,527	-		AO353_05785	0.39	-0.3
1,279,527	-		AO353_05785	0.39	-1.7
1,279,527	-		AO353_05785	0.39	-1.0
1,279,527	-		AO353_05785	0.39	-0.7
1,279,632	+		AO353_05785	0.48	-1.4
1,279,632	+		AO353_05785	0.48	+0.7
1,279,632	+		AO353_05785	0.48	-0.6
1,279,632	+		AO353_05785	0.48	-0.9
1,279,632	+		AO353_05785	0.48	+1.4
1,279,632	+		AO353_05785	0.48	+1.2
1,279,632	+		AO353_05785	0.48	-0.3
1,279,632	+		AO353_05785	0.48	+1.0
1,279,632	+		AO353_05785	0.48	-0.7
1,279,632	+		AO353_05785	0.48	+0.6
1,279,632	+		AO353_05785	0.48	+1.0
1,279,633	-		AO353_05785	0.48	+0.7
1,279,633	-		AO353_05785	0.48	-0.5
1,279,633	-		AO353_05785	0.48	-0.9
1,279,633	-		AO353_05785	0.48	-1.3
1,279,633	-		AO353_05785	0.48	+1.4
1,279,633	-		AO353_05785	0.48	-0.7
1,279,633	-		AO353_05785	0.48	+0.7
1,279,633	-		AO353_05785	0.48	+0.7
1,279,633	-		AO353_05785	0.48	-1.1
1,279,633	-		AO353_05785	0.48	-0.7
1,279,633	-		AO353_05785	0.48	-1.1
1,279,633	-		AO353_05785	0.48	-0.7
1,279,633	-		AO353_05785	0.48	+1.0
1,279,633	-		AO353_05785	0.48	-1.4
1,279,633	-		AO353_05785	0.48	-0.5
1,279,633	-		AO353_05785	0.48	-0.3
1,279,633	-		AO353_05785	0.48	-0.1
1,279,765	-		AO353_05785	0.59	+0.8
1,280,278	+				+1.9
1,280,278	+				+2.2
1,280,278	+				+1.9
1,280,278	+				+1.8
1,280,278	+				+1.7
1,280,278	+				+0.5
1,280,278	+				-0.6
1,280,279	-				+0.8
1,280,279	-				+2.3
1,280,279	-				+1.6
1,280,279	-				-0.1
1,280,279	-				+0.4
1,280,279	-				+0.6
1,280,288	+				+1.3
1,280,288	+				+1.6
1,280,289	-				+0.9
1,280,307	+				+0.4
1,280,307	+				+1.4
1,280,307	+				+2.2
1,280,314	+				+1.4
1,280,314	+				+1.3
1,280,314	+				+1.0
1,280,314	+				+1.2
1,280,315	-				-1.1
1,280,315	-				+1.9
1,280,320	+				+0.8
1,280,320	+				+0.5
1,280,320	+				-1.3
1,280,320	+				+1.6
1,280,320	+				+1.4
1,280,320	+				-0.6
1,280,320	+				+0.8
1,280,320	+				+2.6
1,280,320	+				+2.2
1,280,320	+				-0.4
1,280,320	+				+1.9
1,280,320	+				+0.8
1,280,320	+				+0.9
1,280,321	-				+1.2
1,280,321	-				+1.0
1,280,321	-				+0.9
1,280,321	-				-0.7
1,280,321	-				+1.4
1,280,321	-				+0.9
1,280,321	-				-1.7
1,280,321	-				+0.3
1,280,321	-				-1.0
1,280,321	-				+1.0
1,280,321	-				+0.1
1,280,321	-				-0.1
1,280,321	-				+0.4
1,280,321	-				+1.2
1,280,321	-				+0.5
1,280,321	-				+2.6
1,280,324	+				-0.3
1,280,324	+				+1.4
1,280,324	+				-0.6
1,280,324	+				-1.5
1,280,324	+				+1.2
1,280,324	+				-0.9
1,280,324	+				+0.3
1,280,325	-				-1.0
1,280,325	-				-1.5
1,280,325	-				-0.4
1,280,325	-				+1.0
1,280,325	-				+0.6
1,280,325	-				-0.9
1,280,325	-				-0.2
1,280,332	+				+2.3
1,280,332	+				+1.0
1,280,332	+				+2.2
1,280,332	+				+2.3
1,280,332	+				+1.3
1,280,332	+				+1.3
1,280,332	+				+2.4
1,280,332	+				+4.3
1,280,332	+				+1.5
1,280,332	+				+2.8
1,280,332	+				+1.2
1,280,332	+				+1.5
1,280,333	-				+1.3
1,280,333	-				+0.5
1,280,333	-				+1.0
1,280,333	-				-0.6
1,280,333	-				+0.7
1,280,333	-				-0.5
1,280,333	-				+0.1
1,280,333	-				-0.5
1,280,333	-				-0.4
1,280,333	-				+0.3
1,280,333	-				+1.2
1,280,333	-				+0.9
1,280,333	-				+1.3
1,280,336	+				-0.1
1,280,336	+				+0.8
1,280,336	+				+1.4
1,280,337	-				-1.8
1,280,337	-				-1.0
1,280,337	-				-0.6
1,280,337	-				+1.2
1,280,348	+				+0.1
1,280,348	+				+2.1
1,280,348	+				+0.0
1,280,349	-				-0.4
1,280,349	-				+0.9
1,280,349	-				-1.2
1,280,349	-				+0.8
1,280,349	-				-1.0
1,280,373	+				+0.2
1,280,564	+		AO353_05790	0.30	+2.3
1,280,564	+		AO353_05790	0.30	+1.0
1,280,564	+		AO353_05790	0.30	-0.7
1,280,564	+		AO353_05790	0.30	-0.6
1,280,564	+		AO353_05790	0.30	+0.4
1,280,564	+		AO353_05790	0.30	+1.0
1,280,564	+		AO353_05790	0.30	-0.8
1,280,565	-		AO353_05790	0.30	-1.7
1,280,565	-		AO353_05790	0.30	-0.3
1,280,565	-		AO353_05790	0.30	+0.1
1,280,565	-		AO353_05790	0.30	-1.0
1,280,565	-		AO353_05790	0.30	+0.2
1,280,565	-		AO353_05790	0.30	+1.0
1,280,582	+		AO353_05790	0.33	-1.9
1,280,582	+		AO353_05790	0.33	+0.7
1,280,583	-		AO353_05790	0.33	-1.1
1,280,583	-		AO353_05790	0.33	-1.4
1,280,583	-		AO353_05790	0.33	-0.4
1,280,583	-		AO353_05790	0.33	+0.1
1,280,639	+		AO353_05790	0.43	-1.2
1,280,639	+		AO353_05790	0.43	-1.4
1,280,639	+		AO353_05790	0.43	-2.4
1,280,640	-		AO353_05790	0.43	+0.7
1,280,640	-		AO353_05790	0.43	+2.9
1,280,704	+		AO353_05790	0.54	+0.3
1,280,704	+		AO353_05790	0.54	+0.0
1,280,704	+		AO353_05790	0.54	-0.2
1,280,704	+		AO353_05790	0.54	-0.0
1,280,704	+		AO353_05790	0.54	+3.1
1,280,704	+		AO353_05790	0.54	-1.9
1,280,704	+		AO353_05790	0.54	-1.1
1,280,704	+		AO353_05790	0.54	-2.8
1,280,704	+		AO353_05790	0.54	-0.1
1,280,704	+		AO353_05790	0.54	+1.0
1,280,704	+		AO353_05790	0.54	+0.1
1,280,705	-		AO353_05790	0.54	-1.2
1,280,705	-		AO353_05790	0.54	-0.7
1,280,705	-		AO353_05790	0.54	+1.0
1,280,705	-		AO353_05790	0.54	-0.4
1,280,705	-		AO353_05790	0.54	+1.4
1,280,705	-		AO353_05790	0.54	-1.5
1,280,705	-		AO353_05790	0.54	-1.0
1,280,705	-		AO353_05790	0.54	-0.3
1,280,705	-		AO353_05790	0.54	-0.4
1,280,705	-		AO353_05790	0.54	-0.4
1,280,705	-		AO353_05790	0.54	+0.6
1,280,705	-		AO353_05790	0.54	-0.7
1,280,705	-		AO353_05790	0.54	+1.3
1,280,705	-		AO353_05790	0.54	-0.9
1,280,705	-		AO353_05790	0.54	-0.2
1,280,951	-				-1.2
1,280,951	-				-1.1
1,281,029	+				+0.7
1,281,030	-				+1.0
1,281,063	+				-0.2
1,281,063	+				+0.8
1,281,063	+				+1.8
1,281,063	+				-1.0
1,281,063	+				-2.6
1,281,063	+				-0.4
1,281,063	+				+0.9
1,281,063	+				+1.0
1,281,063	+				+0.2
1,281,063	+				+0.8
1,281,063	+				+0.6
1,281,063	+				-0.0
1,281,063	+				+0.3
1,281,063	+				-1.9
1,281,063	+				-0.7
1,281,063	+				-0.9
1,281,063	+				-1.0
1,281,064	-				-1.9
1,281,064	-				-0.4
1,281,064	-				+1.4
1,281,064	-				+1.6
1,281,064	-				-1.1
1,281,064	-				+0.4
1,281,064	-				-1.0
1,281,064	-				-2.0
1,281,064	-				+0.5
1,281,064	-				+0.1
1,281,064	-				+0.0
1,281,064	-				+0.6
1,281,064	-				-0.5
1,281,064	-				-1.2
1,281,064	-				-2.9
1,281,131	+		AO353_05795	0.14	+2.6
1,281,131	+		AO353_05795	0.14	+1.3
1,281,132	-		AO353_05795	0.14	+0.4
1,281,219	+		AO353_05795	0.32	+0.6
1,281,219	+		AO353_05795	0.32	+0.1
1,281,220	-		AO353_05795	0.33	-1.6
1,281,220	-		AO353_05795	0.33	+0.0