Experiment: 4C survival; 672 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01450 and AO353_01455 overlap by 1 nucleotides AO353_01455 and AO353_01460 overlap by 4 nucleotides AO353_01460 and AO353_01465 are separated by 110 nucleotides
AO353_01450: AO353_01450 - tetraacyldisaccharide 4'-kinase, at 311,056 to 312,066
_01450
AO353_01455: AO353_01455 - biopolymer transporter ExbD, at 312,066 to 312,494
_01455
AO353_01460: AO353_01460 - biopolymer transporter ExbB, at 312,491 to 313,126
_01460
AO353_01465: AO353_01465 - competence protein ComEC, at 313,237 to 315,471
_01465
Position (kb) 312
313 Strain fitness (log2 ratio) -2
-1
0
1
2 at 312.480 kb on - strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.165 kb on - strand at 313.165 kb on - strand at 313.239 kb on - strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.350 kb on - strand at 313.350 kb on - strand at 313.350 kb on - strand at 313.360 kb on - strand at 313.360 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 672 hrs remove 312,480 - -2.3 313,164 + -1.8 313,164 + -1.2 313,164 + -0.1 313,164 + -2.0 313,164 + -1.0 313,165 - -2.3 313,165 - -0.8 313,239 - +0.1 313,349 + -0.8 313,349 + -0.3 313,349 + +0.6 313,349 + +0.2 313,350 - -1.6 313,350 - -1.2 313,350 - +0.7 313,360 - +1.9 313,360 - -2.1
Or see this region's nucleotide sequence