Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2356

Experiment: Succinic Acid; Light intensity 150 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 150 uM
2,741,303	+		Rru_A2354	0.82	+0.2
2,741,304	-		Rru_A2354	0.82	-0.8
2,741,304	-		Rru_A2354	0.82	-1.8
2,741,304	-		Rru_A2354	0.82	-2.4
2,741,602	-				-0.8
2,742,052	-				+0.2
2,742,063	-				+0.2
2,742,226	+				+0.2
2,742,226	+				-1.8
2,742,226	+				-1.8
2,742,227	-				-1.6
2,742,227	-				+1.2
2,742,227	-				-1.4
2,742,227	-				-0.4
2,742,227	-				-1.8
2,742,227	-				-0.8
2,742,227	-				-1.4
2,742,227	-				-0.6
2,742,279	+				-0.8
2,742,279	+				+0.2
2,742,279	+				-1.8
2,742,280	-				+1.2
2,742,280	-				-1.7
2,742,305	+				-1.2
2,742,305	+				-3.4
2,742,305	+				+0.2
2,742,305	+				-1.4
2,742,376	+				-0.6
2,742,377	-				-2.8
2,742,377	-				-0.8
2,742,418	+				-0.8
2,742,550	+		Rru_A2356	0.16	-1.6
2,742,550	+		Rru_A2356	0.16	-0.9
2,742,550	+		Rru_A2356	0.16	-1.7
2,742,550	+		Rru_A2356	0.16	+3.0
2,742,550	+		Rru_A2356	0.16	-0.9
2,742,550	+		Rru_A2356	0.16	+0.2
2,742,550	+		Rru_A2356	0.16	-0.3
2,742,550	+		Rru_A2356	0.16	-1.1
2,742,550	+		Rru_A2356	0.16	+2.2
2,742,550	+		Rru_A2356	0.16	-2.0
2,742,550	+		Rru_A2356	0.16	-2.2
2,742,551	-		Rru_A2356	0.16	-0.3
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,551	-		Rru_A2356	0.16	-1.8
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,551	-		Rru_A2356	0.16	-2.0
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,551	-		Rru_A2356	0.16	+0.2
2,742,552	+		Rru_A2356	0.16	-1.5
2,742,552	+		Rru_A2356	0.16	-0.8
2,742,553	-		Rru_A2356	0.16	-1.6
2,742,553	-		Rru_A2356	0.16	-1.6
2,742,553	-		Rru_A2356	0.16	-0.7
2,742,553	-		Rru_A2356	0.16	-1.1
2,742,673	+		Rru_A2356	0.24	-2.1
2,742,697	+		Rru_A2356	0.25	+0.2
2,742,697	+		Rru_A2356	0.25	-1.4
2,742,697	+		Rru_A2356	0.25	+0.2
2,742,697	+		Rru_A2356	0.25	-1.5
2,742,697	+		Rru_A2356	0.25	-1.6
2,742,698	-		Rru_A2356	0.25	-2.1
2,742,704	-		Rru_A2356	0.26	-2.3
2,742,760	+		Rru_A2356	0.29	+0.2
2,742,761	-		Rru_A2356	0.29	-1.3
2,742,762	+		Rru_A2356	0.29	-0.5
2,742,762	+		Rru_A2356	0.29	-0.8
2,742,762	+		Rru_A2356	0.29	+0.2
2,742,762	+		Rru_A2356	0.29	-1.6
2,742,762	+		Rru_A2356	0.29	-0.6
2,742,763	-		Rru_A2356	0.29	-2.9
2,742,763	-		Rru_A2356	0.29	-1.6
2,742,847	+		Rru_A2356	0.35	+0.2
2,742,855	+		Rru_A2356	0.35	+0.2
2,742,856	-		Rru_A2356	0.35	+0.2
2,742,973	+		Rru_A2356	0.43	-2.0
2,742,973	+		Rru_A2356	0.43	-1.7
2,742,974	-		Rru_A2356	0.43	-1.2
2,742,974	-		Rru_A2356	0.43	-2.2
2,743,168	+		Rru_A2356	0.55	-1.9
2,743,168	+		Rru_A2356	0.55	+0.2
2,743,168	+		Rru_A2356	0.55	-1.3
2,743,169	-		Rru_A2356	0.55	+0.2
2,743,169	-		Rru_A2356	0.55	+1.2
2,743,170	+		Rru_A2356	0.55	+0.2
2,743,170	+		Rru_A2356	0.55	-1.1
2,743,171	-		Rru_A2356	0.55	-2.5
2,743,171	-		Rru_A2356	0.55	+0.2
2,743,258	+		Rru_A2356	0.61	-1.9
2,743,312	+		Rru_A2356	0.64	-1.4
2,743,312	+		Rru_A2356	0.64	-1.5
2,743,429	+		Rru_A2356	0.71	-0.6
2,743,429	+		Rru_A2356	0.71	-0.8
2,743,429	+		Rru_A2356	0.71	-1.1
2,743,430	-		Rru_A2356	0.71	+0.9
2,743,430	-		Rru_A2356	0.71	-1.2
2,743,511	-		Rru_A2356	0.76	+0.2
2,743,526	-		Rru_A2356	0.77	-1.2
2,743,648	+		Rru_A2356	0.85	-0.3
2,743,648	+		Rru_A2356	0.85	-1.6
2,743,648	+		Rru_A2356	0.85	-1.6
2,743,648	+		Rru_A2356	0.85	+0.2
2,743,648	+		Rru_A2356	0.85	+0.2
2,743,648	+		Rru_A2356	0.85	+0.2
2,743,648	+		Rru_A2356	0.85	+0.7
2,743,648	+		Rru_A2356	0.85	-1.7
2,743,649	-		Rru_A2356	0.85	+0.2
2,743,649	-		Rru_A2356	0.85	-1.7
2,743,649	-		Rru_A2356	0.85	+0.2
2,743,649	-		Rru_A2356	0.85	-1.4
2,743,649	-		Rru_A2356	0.85	+0.2
2,743,649	-		Rru_A2356	0.85	-1.2
2,743,649	-		Rru_A2356	0.85	-2.4
2,743,649	-		Rru_A2356	0.85	+1.0
2,743,732	+				+0.6
2,743,732	+				+0.2
2,743,798	+				-0.4
2,743,798	+				-1.0
2,743,799	-				+0.2
2,743,822	-				-0.6
2,743,829	-				-1.4
2,743,829	-				-1.2
2,743,830	+				+2.2
2,743,830	+				-2.8
2,743,830	+				-1.9
2,743,835	+				+2.5
2,743,836	-				-1.3
2,743,836	-				+0.2
2,743,854	+				+0.2
2,743,854	+				-1.7
2,743,854	+				+0.2
2,743,854	+				+1.8
2,743,855	-				-1.1
2,743,855	-				+0.2
2,744,000	-				-1.0
2,744,009	+				+0.2
2,744,009	+				+0.2
2,744,009	+				-0.5
2,744,009	+				+0.2
2,744,009	+				-0.4
2,744,010	-				-1.2
2,744,010	-				-2.6
2,744,010	-				+0.6
2,744,010	-				-1.4
2,744,256	+		Rru_A2357	0.19	-2.0
2,744,256	+		Rru_A2357	0.19	-0.6
2,744,256	+		Rru_A2357	0.19	+0.2
2,744,257	-		Rru_A2357	0.19	-0.1
2,744,257	-		Rru_A2357	0.19	-1.8
2,744,257	-		Rru_A2357	0.19	-1.2
2,744,257	-		Rru_A2357	0.19	-1.8
2,744,257	-		Rru_A2357	0.19	-0.4
2,744,265	+		Rru_A2357	0.20	+0.2
2,744,297	+		Rru_A2357	0.23	-2.2
2,744,298	-		Rru_A2357	0.23	-0.8
2,744,298	-		Rru_A2357	0.23	-1.9
2,744,298	-		Rru_A2357	0.23	-2.2
2,744,298	-		Rru_A2357	0.23	-2.8
2,744,481	+		Rru_A2357	0.42	+0.2
2,744,481	+		Rru_A2357	0.42	-1.8
2,744,482	-		Rru_A2357	0.42	-1.7
2,744,482	-		Rru_A2357	0.42	-2.2
2,744,516	+		Rru_A2357	0.45	+0.2
2,744,519	+		Rru_A2357	0.45	-1.8
2,744,519	+		Rru_A2357	0.45	-1.1
2,744,519	+		Rru_A2357	0.45	-1.4
2,744,520	-		Rru_A2357	0.45	-1.8
2,744,520	-		Rru_A2357	0.45	-1.2
2,744,520	-		Rru_A2357	0.45	-0.2
2,744,520	-		Rru_A2357	0.45	-0.9
2,744,520	-		Rru_A2357	0.45	-3.2
2,744,520	-		Rru_A2357	0.45	+0.2
2,744,520	-		Rru_A2357	0.45	-0.8
2,744,520	-		Rru_A2357	0.45	+0.2
2,744,520	-		Rru_A2357	0.45	-1.4
2,744,520	-		Rru_A2357	0.45	+0.2
2,744,757	+		Rru_A2357	0.69	+0.2
2,744,757	+		Rru_A2357	0.69	+0.2
2,744,757	+		Rru_A2357	0.69	-0.8
2,744,757	+		Rru_A2357	0.69	-2.5
2,744,757	+		Rru_A2357	0.69	-2.2
2,744,758	-		Rru_A2357	0.69	-4.0
2,744,758	-		Rru_A2357	0.69	-1.1
2,744,758	-		Rru_A2357	0.69	+0.2