Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0033

Experiment: Succinic Acid; Light intensity 150 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 150 uM
31,539	+		Rru_B0031	0.70	-2.0
31,539	+		Rru_B0031	0.70	-0.0
31,539	+		Rru_B0031	0.70	-1.5
31,539	+		Rru_B0031	0.70	-0.0
31,540	-		Rru_B0031	0.70	-0.0
31,540	-		Rru_B0031	0.70	-1.2
31,540	-		Rru_B0031	0.70	-1.6
31,540	-		Rru_B0031	0.70	-0.0
31,548	+		Rru_B0031	0.71	-2.0
31,548	+		Rru_B0031	0.71	-0.0
31,548	+		Rru_B0031	0.71	-0.0
31,548	+		Rru_B0031	0.71	-2.3
31,548	+		Rru_B0031	0.71	-2.3
31,549	-		Rru_B0031	0.71	-1.5
31,549	-		Rru_B0031	0.71	-0.0
31,549	-		Rru_B0031	0.71	-0.0
31,549	-		Rru_B0031	0.71	-1.0
31,626	+		Rru_B0031	0.76	-1.5
31,626	+		Rru_B0031	0.76	-1.5
31,626	+		Rru_B0031	0.76	-0.2
31,626	+		Rru_B0031	0.76	-0.0
31,626	+		Rru_B0031	0.76	-1.4
31,626	+		Rru_B0031	0.76	-0.0
31,626	+		Rru_B0031	0.76	-2.8
31,627	-		Rru_B0031	0.76	-2.2
31,627	-		Rru_B0031	0.76	-1.1
31,627	-		Rru_B0031	0.76	-0.0
31,627	-		Rru_B0031	0.76	-0.0
31,627	-		Rru_B0031	0.76	-1.9
31,627	-		Rru_B0031	0.76	-2.0
31,627	-		Rru_B0031	0.76	-1.4
31,627	-		Rru_B0031	0.76	-1.8
31,627	-		Rru_B0031	0.76	-0.0
31,627	-		Rru_B0031	0.76	-1.0
31,627	-		Rru_B0031	0.76	-1.4
31,627	-		Rru_B0031	0.76	-1.0
31,627	-		Rru_B0031	0.76	-1.2
31,854	+				-1.2
31,938	+				-1.7
31,939	-				-0.0
31,951	+				-0.0
31,951	+				-0.0
31,951	+				-2.1
31,951	+				-2.1
31,951	+				-1.2
31,952	-				-3.6
31,952	-				-0.7
31,952	-				-1.3
31,953	+				-0.0
31,954	-				-0.0
31,971	+				-1.3
31,971	+				-0.0
31,971	+				-1.3
31,971	+				-0.0
31,971	+				+1.0
31,971	+				-1.3
31,971	+				-3.7
31,972	-				-0.0
31,972	-				-0.0
31,972	-				-1.1
31,972	-				-2.1
31,972	-				-1.4
31,972	-				-0.0
32,013	+				-1.8
32,013	+				-0.0
32,014	-				-0.0
32,029	+				+0.6
32,030	-				-0.7
32,030	-				-1.7
32,058	+				-0.2
32,059	-				-0.0
32,059	-				-1.4
32,128	+		Rru_B0032	0.17	-1.0
32,129	-		Rru_B0032	0.17	-2.0
32,129	-		Rru_B0032	0.17	-0.0
32,180	+		Rru_B0032	0.34	-0.0
32,180	+		Rru_B0032	0.34	-1.3
32,180	+		Rru_B0032	0.34	-0.0
32,180	+		Rru_B0032	0.34	-1.3
32,180	+		Rru_B0032	0.34	+1.0
32,181	-		Rru_B0032	0.35	-0.9
32,181	-		Rru_B0032	0.35	-0.9
32,181	-		Rru_B0032	0.35	-1.9
32,181	-		Rru_B0032	0.35	-0.0
32,239	+		Rru_B0032	0.54	-0.0
32,239	+		Rru_B0032	0.54	-0.0
32,240	-		Rru_B0032	0.54	-2.8
32,381	+				-1.6
32,381	+				-0.0
32,381	+				-1.0
32,381	+				-1.1
32,381	+				-0.0
32,382	-				-0.0
32,417	+				-1.9
32,418	-				-0.0
32,492	+				-1.8
32,502	-				-0.0
32,711	-		Rru_B0033	0.32	-2.2
32,711	-		Rru_B0033	0.32	-1.6
32,764	+		Rru_B0033	0.40	-1.5
32,819	+		Rru_B0033	0.48	-0.0
32,819	+		Rru_B0033	0.48	-0.0
32,820	-		Rru_B0033	0.48	-0.0
32,820	-		Rru_B0033	0.48	-1.5
32,828	+		Rru_B0033	0.49	-0.0
32,828	+		Rru_B0033	0.49	-1.0
32,828	+		Rru_B0033	0.49	-1.8
32,829	-		Rru_B0033	0.49	-2.0
32,830	+		Rru_B0033	0.49	-0.0
32,831	-		Rru_B0033	0.49	-1.7
32,831	-		Rru_B0033	0.49	-0.0
32,831	-		Rru_B0033	0.49	-1.7
32,831	-		Rru_B0033	0.49	-0.0
32,831	-		Rru_B0033	0.49	-0.0
32,851	+		Rru_B0033	0.52	-2.2
32,851	+		Rru_B0033	0.52	+1.0
32,851	+		Rru_B0033	0.52	-0.7
32,852	-		Rru_B0033	0.52	-2.5
32,852	-		Rru_B0033	0.52	+0.4
32,867	+		Rru_B0033	0.55	-2.3
32,867	+		Rru_B0033	0.55	-0.0
32,868	-		Rru_B0033	0.55	-0.0
32,868	-		Rru_B0033	0.55	-1.6
32,869	+		Rru_B0033	0.55	-0.0
32,869	+		Rru_B0033	0.55	-0.8
32,869	+		Rru_B0033	0.55	-2.3
32,869	+		Rru_B0033	0.55	-3.1
32,869	+		Rru_B0033	0.55	-3.0
32,870	-		Rru_B0033	0.55	-0.0
32,870	-		Rru_B0033	0.55	-0.0
32,870	-		Rru_B0033	0.55	-1.2
32,870	-		Rru_B0033	0.55	-1.6
32,881	+		Rru_B0033	0.56	-0.0
32,881	+		Rru_B0033	0.56	-2.8
32,881	+		Rru_B0033	0.56	+1.0
32,881	+		Rru_B0033	0.56	-0.9
32,881	+		Rru_B0033	0.56	-1.0
32,881	+		Rru_B0033	0.56	-1.9
32,882	-		Rru_B0033	0.57	-0.0
32,929	+		Rru_B0033	0.63	-0.0
32,929	+		Rru_B0033	0.63	-0.0
32,929	+		Rru_B0033	0.63	-1.2
32,930	-		Rru_B0033	0.63	-3.0
32,930	-		Rru_B0033	0.63	-2.0
32,930	-		Rru_B0033	0.63	-2.6
32,930	-		Rru_B0033	0.63	-0.0
32,930	-		Rru_B0033	0.63	-1.7
33,028	+		Rru_B0033	0.77	-1.2
33,029	-		Rru_B0033	0.77	-0.6
33,029	-		Rru_B0033	0.77	-1.0
33,029	-		Rru_B0033	0.77	-3.0
33,029	-		Rru_B0033	0.77	+0.5
33,029	-		Rru_B0033	0.77	-0.0
33,201	-				-1.0
33,247	+				-0.0
33,248	-				-0.0
33,271	+				+0.3
33,273	+				-0.0
33,275	+				-0.0
33,275	+				-1.9
33,275	+				-0.0
33,276	-				-1.6
33,276	-				-3.5
33,276	-				-0.0
33,278	+				-1.0
33,285	+				-1.9
33,286	-				-0.0
33,287	+				-0.0
33,288	-				-0.8
33,568	-				-0.0
33,672	+		Rru_B0035	0.36	-0.0
33,672	+		Rru_B0035	0.36	-1.6
33,672	+		Rru_B0035	0.36	-1.0
33,672	+		Rru_B0035	0.36	-0.0
33,673	-		Rru_B0035	0.37	-1.6
33,673	-		Rru_B0035	0.37	-0.0
33,674	+		Rru_B0035	0.37	-1.0
33,674	+		Rru_B0035	0.37	-1.2
33,674	+		Rru_B0035	0.37	-1.0
33,674	+		Rru_B0035	0.37	-0.0
33,674	+		Rru_B0035	0.37	-1.7
33,674	+		Rru_B0035	0.37	-0.0
33,675	-		Rru_B0035	0.37	-1.1
33,675	-		Rru_B0035	0.37	-1.8
33,675	-		Rru_B0035	0.37	-1.5
33,675	-		Rru_B0035	0.37	-0.0
33,675	-		Rru_B0035	0.37	-0.0
33,675	-		Rru_B0035	0.37	-0.0
33,675	-		Rru_B0035	0.37	-0.0
33,675	-		Rru_B0035	0.37	-0.0
33,675	-		Rru_B0035	0.37	-1.7
33,675	-		Rru_B0035	0.37	-0.4
33,675	-		Rru_B0035	0.37	-1.0
33,708	+		Rru_B0035	0.46	-2.0
33,708	+		Rru_B0035	0.46	-0.0
33,708	+		Rru_B0035	0.46	-3.1
33,709	-		Rru_B0035	0.46	-0.0
33,709	-		Rru_B0035	0.46	-1.8
33,709	-		Rru_B0035	0.46	-0.0
33,709	-		Rru_B0035	0.46	-0.0
33,714	+		Rru_B0035	0.47	-1.4
33,714	+		Rru_B0035	0.47	-0.5
33,714	+		Rru_B0035	0.47	-0.0
33,715	-		Rru_B0035	0.48	-2.4
33,715	-		Rru_B0035	0.48	-2.3
33,715	-		Rru_B0035	0.48	-0.0
33,715	-		Rru_B0035	0.48	-0.0
33,863	+		Rru_B0035	0.86	-1.3
33,863	+		Rru_B0035	0.86	-0.0
33,863	+		Rru_B0035	0.86	-2.0
33,863	+		Rru_B0035	0.86	-1.6
33,863	+		Rru_B0035	0.86	-0.0
33,864	-		Rru_B0035	0.86	-0.0
33,864	-		Rru_B0035	0.86	-1.9
33,864	-		Rru_B0035	0.86	-0.0
33,928	+				-0.0
33,928	+				-2.6
33,928	+				-0.7
33,929	-				-0.0
33,929	-				+0.2
33,930	+				-0.0
33,930	+				-1.8
33,930	+				-0.0
33,931	-				-1.1
33,931	-				-1.0
33,931	-				-3.9
34,001	+				-1.3
34,001	+				+1.5
34,001	+				-1.2
34,001	+				-0.0
34,001	+				-0.0
34,002	-				-1.5
34,002	-				-2.0
34,002	-				-1.0
34,002	-				-1.0
34,002	-				-1.6
34,002	-				-2.3
34,092	+		Rru_B0036	0.13	-2.4
34,092	+		Rru_B0036	0.13	-0.0
34,092	+		Rru_B0036	0.13	-1.2
34,093	-		Rru_B0036	0.13	-0.0
34,121	+		Rru_B0036	0.15	-0.6
34,121	+		Rru_B0036	0.15	-2.3
34,121	+		Rru_B0036	0.15	-0.0