Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24295 and BWI76_RS24300 are separated by 196 nucleotides BWI76_RS24300 and BWI76_RS24305 are separated by 132 nucleotides
BWI76_RS24295: BWI76_RS24295 - AraC family transcriptional regulator, at 5,061,333 to 5,062,232
_RS24295
BWI76_RS24300: BWI76_RS24300 - NADH-dependent alcohol dehydrogenase, at 5,062,429 to 5,063,592
_RS24300
BWI76_RS24305: BWI76_RS24305 - 2,5-didehydrogluconate reductase A, at 5,063,725 to 5,064,552
_RS24305
Position (kb)
5062
5063
5064 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5061.432 kb on - strand, within BWI76_RS24295 at 5061.572 kb on + strand, within BWI76_RS24295 at 5061.662 kb on - strand at 5061.719 kb on + strand, within BWI76_RS24295 at 5061.953 kb on + strand, within BWI76_RS24295 at 5062.013 kb on + strand, within BWI76_RS24295 at 5062.126 kb on - strand, within BWI76_RS24295 at 5062.149 kb on - strand at 5062.252 kb on - strand at 5062.717 kb on + strand, within BWI76_RS24300 at 5062.763 kb on - strand, within BWI76_RS24300 at 5062.973 kb on - strand, within BWI76_RS24300 at 5063.100 kb on + strand, within BWI76_RS24300 at 5063.108 kb on - strand, within BWI76_RS24300 at 5063.214 kb on + strand, within BWI76_RS24300 at 5063.272 kb on + strand, within BWI76_RS24300 at 5063.389 kb on - strand, within BWI76_RS24300 at 5063.638 kb on - strand at 5063.646 kb on + strand at 5063.666 kb on + strand at 5063.674 kb on - strand at 5063.710 kb on - strand at 5063.763 kb on + strand at 5063.783 kb on - strand at 5063.910 kb on - strand, within BWI76_RS24305 at 5063.912 kb on + strand, within BWI76_RS24305 at 5063.920 kb on - strand, within BWI76_RS24305 at 5063.976 kb on + strand, within BWI76_RS24305 at 5063.976 kb on + strand, within BWI76_RS24305 at 5064.083 kb on + strand, within BWI76_RS24305 at 5064.307 kb on + strand, within BWI76_RS24305 at 5064.385 kb on + strand, within BWI76_RS24305 at 5064.385 kb on + strand, within BWI76_RS24305 at 5064.385 kb on + strand, within BWI76_RS24305 at 5064.510 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 5,061,432 - BWI76_RS24295 0.11 +0.2 5,061,572 + BWI76_RS24295 0.27 -0.4 5,061,662 - +0.4 5,061,719 + BWI76_RS24295 0.43 +0.0 5,061,953 + BWI76_RS24295 0.69 +0.6 5,062,013 + BWI76_RS24295 0.76 +0.8 5,062,126 - BWI76_RS24295 0.88 -0.8 5,062,149 - +1.0 5,062,252 - -1.1 5,062,717 + BWI76_RS24300 0.25 +0.4 5,062,763 - BWI76_RS24300 0.29 -0.7 5,062,973 - BWI76_RS24300 0.47 -0.4 5,063,100 + BWI76_RS24300 0.58 -0.5 5,063,108 - BWI76_RS24300 0.58 -2.2 5,063,214 + BWI76_RS24300 0.67 +0.1 5,063,272 + BWI76_RS24300 0.72 -0.3 5,063,389 - BWI76_RS24300 0.82 -1.6 5,063,638 - -2.8 5,063,646 + +0.5 5,063,666 + -0.5 5,063,674 - -0.4 5,063,710 - -1.8 5,063,763 + +0.2 5,063,783 - -0.4 5,063,910 - BWI76_RS24305 0.22 -0.2 5,063,912 + BWI76_RS24305 0.23 -0.6 5,063,920 - BWI76_RS24305 0.24 -0.0 5,063,976 + BWI76_RS24305 0.30 -0.2 5,063,976 + BWI76_RS24305 0.30 -3.0 5,064,083 + BWI76_RS24305 0.43 +1.5 5,064,307 + BWI76_RS24305 0.70 -0.5 5,064,385 + BWI76_RS24305 0.80 +0.7 5,064,385 + BWI76_RS24305 0.80 -0.4 5,064,385 + BWI76_RS24305 0.80 -3.2 5,064,510 + -2.9
Or see this region's nucleotide sequence