Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23510 and BWI76_RS23515 are separated by 39 nucleotides BWI76_RS23515 and BWI76_RS23520 are separated by 382 nucleotides BWI76_RS23520 and BWI76_RS23525 are separated by 394 nucleotides
BWI76_RS23510: BWI76_RS23510 - transcriptional regulator, at 4,905,473 to 4,906,195
_RS23510
BWI76_RS23515: BWI76_RS23515 - antibiotic biosynthesis monooxygenase, at 4,906,235 to 4,906,552
_RS23515
BWI76_RS23520: BWI76_RS23520 - hypothetical protein, at 4,906,935 to 4,907,144
_RS23520
BWI76_RS23525: BWI76_RS23525 - EamA family transporter, at 4,907,539 to 4,908,429
_RS23525
Position (kb)
4906
4907 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4905.245 kb on + strand at 4905.253 kb on - strand at 4905.286 kb on + strand at 4905.294 kb on - strand at 4905.308 kb on + strand at 4905.308 kb on + strand at 4905.326 kb on - strand at 4905.338 kb on - strand at 4905.505 kb on + strand at 4905.525 kb on - strand at 4905.527 kb on + strand at 4905.530 kb on + strand at 4905.572 kb on + strand, within BWI76_RS23510 at 4905.573 kb on - strand, within BWI76_RS23510 at 4905.714 kb on - strand, within BWI76_RS23510 at 4905.740 kb on + strand, within BWI76_RS23510 at 4905.748 kb on - strand, within BWI76_RS23510 at 4905.781 kb on + strand at 4905.833 kb on + strand, within BWI76_RS23510 at 4905.875 kb on - strand, within BWI76_RS23510 at 4906.055 kb on - strand, within BWI76_RS23510 at 4906.413 kb on + strand, within BWI76_RS23515 at 4906.488 kb on - strand, within BWI76_RS23515 at 4906.523 kb on + strand at 4906.538 kb on - strand at 4906.612 kb on - strand at 4906.802 kb on + strand at 4907.013 kb on - strand, within BWI76_RS23520 at 4907.133 kb on - strand at 4907.173 kb on - strand at 4907.173 kb on - strand at 4907.380 kb on - strand at 4907.380 kb on - strand at 4907.394 kb on - strand at 4907.407 kb on + strand at 4907.422 kb on - strand at 4907.439 kb on - strand at 4907.526 kb on + strand at 4907.534 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 4,905,245 + +1.7 4,905,253 - +0.5 4,905,286 + -3.7 4,905,294 - -3.0 4,905,308 + -1.1 4,905,308 + -2.3 4,905,326 - +1.1 4,905,338 - -3.2 4,905,505 + +0.6 4,905,525 - +1.6 4,905,527 + -2.3 4,905,530 + +1.2 4,905,572 + BWI76_RS23510 0.14 +0.0 4,905,573 - BWI76_RS23510 0.14 -0.9 4,905,714 - BWI76_RS23510 0.33 +0.5 4,905,740 + BWI76_RS23510 0.37 -1.2 4,905,748 - BWI76_RS23510 0.38 +0.0 4,905,781 + +0.3 4,905,833 + BWI76_RS23510 0.50 +1.3 4,905,875 - BWI76_RS23510 0.56 +1.3 4,906,055 - BWI76_RS23510 0.80 +0.3 4,906,413 + BWI76_RS23515 0.56 -2.4 4,906,488 - BWI76_RS23515 0.80 -2.1 4,906,523 + +2.7 4,906,538 - +1.1 4,906,612 - -0.0 4,906,802 + -3.8 4,907,013 - BWI76_RS23520 0.37 -0.8 4,907,133 - -0.2 4,907,173 - +0.1 4,907,173 - -2.2 4,907,380 - -1.4 4,907,380 - -0.4 4,907,394 - -1.5 4,907,407 + +1.8 4,907,422 - -2.6 4,907,439 - +0.0 4,907,526 + +2.8 4,907,534 - +0.0
Or see this region's nucleotide sequence