Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23275 and BWI76_RS23280 are separated by 39 nucleotides BWI76_RS23280 and BWI76_RS23285 are separated by 219 nucleotides BWI76_RS23285 and BWI76_RS23290 are separated by 16 nucleotides BWI76_RS23290 and BWI76_RS23295 are separated by 85 nucleotides BWI76_RS23295 and BWI76_RS23300 are separated by 124 nucleotides
BWI76_RS23275: BWI76_RS23275 - RNA pyrophosphohydrolase, at 4,856,343 to 4,856,873
_RS23275
BWI76_RS23280: BWI76_RS23280 - hypothetical protein, at 4,856,913 to 4,857,095
_RS23280
BWI76_RS23285: BWI76_RS23285 - hypothetical protein, at 4,857,315 to 4,857,539
_RS23285
BWI76_RS23290: BWI76_RS23290 - DNA mismatch repair protein MutH, at 4,857,556 to 4,858,248
_RS23290
BWI76_RS23295: BWI76_RS23295 - tellurium resistance protein TerC, at 4,858,334 to 4,859,047
_RS23295
BWI76_RS23300: BWI76_RS23300 - YgdI/YgdR family lipoprotein, at 4,859,172 to 4,859,390
_RS23300
Position (kb) 4857
4858
4859 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4856.929 kb on + strand at 4856.995 kb on + strand, within BWI76_RS23280 at 4857.274 kb on - strand at 4857.369 kb on + strand, within BWI76_RS23285 at 4857.584 kb on - strand at 4857.656 kb on + strand, within BWI76_RS23290 at 4857.840 kb on - strand, within BWI76_RS23290 at 4857.853 kb on + strand, within BWI76_RS23290 at 4857.927 kb on + strand, within BWI76_RS23290 at 4857.956 kb on - strand, within BWI76_RS23290 at 4858.052 kb on + strand, within BWI76_RS23290 at 4858.060 kb on - strand, within BWI76_RS23290 at 4858.129 kb on + strand, within BWI76_RS23290 at 4858.134 kb on + strand, within BWI76_RS23290 at 4858.137 kb on - strand, within BWI76_RS23290 at 4858.165 kb on + strand, within BWI76_RS23290 at 4858.282 kb on + strand at 4858.290 kb on - strand at 4858.365 kb on - strand at 4858.458 kb on - strand, within BWI76_RS23295 at 4858.487 kb on + strand, within BWI76_RS23295 at 4858.489 kb on + strand, within BWI76_RS23295 at 4858.525 kb on + strand, within BWI76_RS23295 at 4858.682 kb on + strand, within BWI76_RS23295 at 4858.760 kb on - strand, within BWI76_RS23295 at 4858.928 kb on + strand, within BWI76_RS23295 at 4858.975 kb on - strand, within BWI76_RS23295 at 4859.010 kb on + strand at 4859.146 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 4,856,929 + -0.5 4,856,995 + BWI76_RS23280 0.45 +0.1 4,857,274 - -0.8 4,857,369 + BWI76_RS23285 0.24 -0.1 4,857,584 - -0.1 4,857,656 + BWI76_RS23290 0.14 -0.5 4,857,840 - BWI76_RS23290 0.41 +1.2 4,857,853 + BWI76_RS23290 0.43 +0.6 4,857,927 + BWI76_RS23290 0.54 -1.6 4,857,956 - BWI76_RS23290 0.58 -0.5 4,858,052 + BWI76_RS23290 0.72 +0.0 4,858,060 - BWI76_RS23290 0.73 -0.8 4,858,129 + BWI76_RS23290 0.83 -1.9 4,858,134 + BWI76_RS23290 0.83 -0.9 4,858,137 - BWI76_RS23290 0.84 -0.3 4,858,165 + BWI76_RS23290 0.88 -2.9 4,858,282 + +1.1 4,858,290 - +1.4 4,858,365 - +0.6 4,858,458 - BWI76_RS23295 0.17 +1.1 4,858,487 + BWI76_RS23295 0.21 +0.1 4,858,489 + BWI76_RS23295 0.22 +0.2 4,858,525 + BWI76_RS23295 0.27 -1.0 4,858,682 + BWI76_RS23295 0.49 -0.1 4,858,760 - BWI76_RS23295 0.60 -0.4 4,858,928 + BWI76_RS23295 0.83 +0.3 4,858,975 - BWI76_RS23295 0.90 -3.5 4,859,010 + +0.7 4,859,146 - +0.2
Or see this region's nucleotide sequence