Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23220 and BWI76_RS23225 are separated by 40 nucleotides BWI76_RS23225 and BWI76_RS23230 overlap by 4 nucleotides
BWI76_RS23220: BWI76_RS23220 - amino-acid N-acetyltransferase, at 4,837,081 to 4,838,412
_RS23220
BWI76_RS23225: BWI76_RS23225 - exonuclease V subunit alpha, at 4,838,453 to 4,840,288
_RS23225
BWI76_RS23230: BWI76_RS23230 - exodeoxyribonuclease V subunit beta, at 4,840,285 to 4,843,830
_RS23230
Position (kb)
4838
4839
4840
4841 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2
3 at 4837.458 kb on - strand, within BWI76_RS23220 at 4837.462 kb on - strand, within BWI76_RS23220 at 4837.491 kb on + strand, within BWI76_RS23220 at 4837.491 kb on + strand, within BWI76_RS23220 at 4837.499 kb on - strand, within BWI76_RS23220 at 4837.499 kb on - strand, within BWI76_RS23220 at 4837.631 kb on + strand, within BWI76_RS23220 at 4837.644 kb on - strand, within BWI76_RS23220 at 4838.047 kb on - strand, within BWI76_RS23220 at 4838.141 kb on - strand, within BWI76_RS23220 at 4838.516 kb on + strand at 4838.516 kb on + strand at 4838.561 kb on + strand at 4838.624 kb on - strand at 4838.649 kb on - strand, within BWI76_RS23225 at 4838.700 kb on + strand, within BWI76_RS23225 at 4839.068 kb on - strand, within BWI76_RS23225 at 4839.150 kb on - strand, within BWI76_RS23225 at 4839.411 kb on + strand, within BWI76_RS23225 at 4839.713 kb on - strand, within BWI76_RS23225 at 4839.788 kb on + strand, within BWI76_RS23225 at 4839.951 kb on + strand, within BWI76_RS23225 at 4839.951 kb on + strand, within BWI76_RS23225 at 4840.660 kb on - strand, within BWI76_RS23230 at 4841.007 kb on - strand, within BWI76_RS23230
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 4,837,458 - BWI76_RS23220 0.28 -2.6 4,837,462 - BWI76_RS23220 0.29 -5.8 4,837,491 + BWI76_RS23220 0.31 -4.3 4,837,491 + BWI76_RS23220 0.31 -2.2 4,837,499 - BWI76_RS23220 0.31 -1.5 4,837,499 - BWI76_RS23220 0.31 -4.8 4,837,631 + BWI76_RS23220 0.41 -2.5 4,837,644 - BWI76_RS23220 0.42 -4.4 4,838,047 - BWI76_RS23220 0.73 -2.9 4,838,141 - BWI76_RS23220 0.80 -4.3 4,838,516 + -0.7 4,838,516 + -0.9 4,838,561 + +0.1 4,838,624 - +2.9 4,838,649 - BWI76_RS23225 0.11 +0.6 4,838,700 + BWI76_RS23225 0.13 -0.7 4,839,068 - BWI76_RS23225 0.33 -3.3 4,839,150 - BWI76_RS23225 0.38 -0.0 4,839,411 + BWI76_RS23225 0.52 -0.5 4,839,713 - BWI76_RS23225 0.69 -3.5 4,839,788 + BWI76_RS23225 0.73 -0.7 4,839,951 + BWI76_RS23225 0.82 +0.4 4,839,951 + BWI76_RS23225 0.82 -1.0 4,840,660 - BWI76_RS23230 0.11 -2.0 4,841,007 - BWI76_RS23230 0.20 -1.5
Or see this region's nucleotide sequence