Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22440 and BWI76_RS22445 are separated by 124 nucleotides BWI76_RS22445 and BWI76_RS22450 are separated by 45 nucleotides BWI76_RS22450 and BWI76_RS22455 are separated by 215 nucleotides
BWI76_RS22440: BWI76_RS22440 - iron ABC transporter permease, at 4,678,733 to 4,679,587
_RS22440
BWI76_RS22445: BWI76_RS22445 - hypothetical protein, at 4,679,712 to 4,680,086
_RS22445
BWI76_RS22450: BWI76_RS22450 - selenoprotein W-related protein, at 4,680,132 to 4,680,416
_RS22450
BWI76_RS22455: BWI76_RS22455 - TonB-dependent receptor, at 4,680,632 to 4,683,001
_RS22455
Position (kb)
4680
4681 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4679.211 kb on + strand, within BWI76_RS22440 at 4679.272 kb on + strand, within BWI76_RS22440 at 4679.366 kb on - strand, within BWI76_RS22440 at 4679.425 kb on - strand, within BWI76_RS22440 at 4679.489 kb on + strand, within BWI76_RS22440 at 4679.642 kb on - strand at 4679.680 kb on - strand at 4680.060 kb on - strand at 4680.111 kb on - strand at 4680.206 kb on - strand, within BWI76_RS22450 at 4680.382 kb on + strand, within BWI76_RS22450 at 4680.572 kb on - strand at 4680.580 kb on - strand at 4680.580 kb on - strand at 4680.582 kb on - strand at 4680.582 kb on - strand at 4680.632 kb on + strand at 4680.642 kb on - strand at 4680.642 kb on - strand at 4680.725 kb on + strand at 4680.771 kb on + strand at 4680.881 kb on + strand, within BWI76_RS22455 at 4681.226 kb on - strand, within BWI76_RS22455
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 4,679,211 + BWI76_RS22440 0.56 -0.0 4,679,272 + BWI76_RS22440 0.63 -1.2 4,679,366 - BWI76_RS22440 0.74 -0.3 4,679,425 - BWI76_RS22440 0.81 +0.4 4,679,489 + BWI76_RS22440 0.88 +0.3 4,679,642 - -4.2 4,679,680 - -2.1 4,680,060 - -1.6 4,680,111 - +0.3 4,680,206 - BWI76_RS22450 0.26 -2.2 4,680,382 + BWI76_RS22450 0.88 -1.2 4,680,572 - -0.4 4,680,580 - -0.5 4,680,580 - +0.1 4,680,582 - +0.0 4,680,582 - -0.2 4,680,632 + +0.2 4,680,642 - +2.3 4,680,642 - -0.3 4,680,725 + +0.6 4,680,771 + +1.1 4,680,881 + BWI76_RS22455 0.11 -0.9 4,681,226 - BWI76_RS22455 0.25 +0.1
Or see this region's nucleotide sequence