Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15780 and BWI76_RS15785 are separated by 42 nucleotides BWI76_RS15785 and BWI76_RS15790 overlap by 4 nucleotides BWI76_RS15790 and BWI76_RS15795 are separated by 133 nucleotides BWI76_RS15795 and BWI76_RS15800 are separated by 39 nucleotides BWI76_RS15800 and BWI76_RS15805 are separated by 104 nucleotides
BWI76_RS15780: BWI76_RS15780 - hypothetical protein, at 3,284,273 to 3,285,513
_RS15780
BWI76_RS15785: BWI76_RS15785 - replication protein, at 3,285,556 to 3,286,017
_RS15785
BWI76_RS15790: BWI76_RS15790 - replication protein, at 3,286,014 to 3,286,742
_RS15790
BWI76_RS15795: BWI76_RS15795 - bacteriophage CII family protein, at 3,286,876 to 3,287,097
_RS15795
BWI76_RS15800: BWI76_RS15800 - transcriptional regulator, at 3,287,137 to 3,287,370
_RS15800
BWI76_RS15805: BWI76_RS15805 - hypothetical protein, at 3,287,475 to 3,288,164
_RS15805
Position (kb) 3286
3287 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3285.556 kb on + strand at 3285.612 kb on + strand, within BWI76_RS15785 at 3285.708 kb on + strand, within BWI76_RS15785 at 3285.816 kb on + strand, within BWI76_RS15785 at 3285.998 kb on + strand at 3286.105 kb on + strand, within BWI76_RS15790 at 3286.245 kb on + strand, within BWI76_RS15790 at 3286.453 kb on - strand, within BWI76_RS15790 at 3286.687 kb on + strand at 3286.709 kb on - strand at 3286.717 kb on - strand at 3286.925 kb on + strand, within BWI76_RS15795 at 3286.974 kb on + strand, within BWI76_RS15795 at 3287.135 kb on + strand at 3287.186 kb on + strand, within BWI76_RS15800 at 3287.292 kb on + strand, within BWI76_RS15800
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 3,285,556 + -2.4 3,285,612 + BWI76_RS15785 0.12 +1.1 3,285,708 + BWI76_RS15785 0.33 +0.4 3,285,816 + BWI76_RS15785 0.56 -1.9 3,285,998 + +0.0 3,286,105 + BWI76_RS15790 0.12 -0.6 3,286,245 + BWI76_RS15790 0.32 -3.1 3,286,453 - BWI76_RS15790 0.60 -0.6 3,286,687 + +0.2 3,286,709 - -0.3 3,286,717 - +0.5 3,286,925 + BWI76_RS15795 0.22 +0.5 3,286,974 + BWI76_RS15795 0.44 -0.0 3,287,135 + +0.6 3,287,186 + BWI76_RS15800 0.21 +0.2 3,287,292 + BWI76_RS15800 0.66 +0.2
Or see this region's nucleotide sequence