Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09780 and BWI76_RS09785 are separated by 150 nucleotides BWI76_RS09785 and BWI76_RS09790 are separated by 215 nucleotides BWI76_RS09790 and BWI76_RS09795 are separated by 45 nucleotides
BWI76_RS09780: BWI76_RS09780 - 30S ribosomal protein S1, at 2,050,507 to 2,052,180
_RS09780
BWI76_RS09785: BWI76_RS09785 - integration host factor subunit beta, at 2,052,331 to 2,052,618
_RS09785
BWI76_RS09790: BWI76_RS09790 - ComEC family protein, at 2,052,834 to 2,055,089
_RS09790
BWI76_RS09795: BWI76_RS09795 - lipid ABC transporter permease/ATP-binding protein, at 2,055,135 to 2,056,883
_RS09795
Position (kb)
2052
2053
2054
2055
2056 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2052.284 kb on + strand at 2052.704 kb on - strand at 2052.887 kb on - strand at 2052.918 kb on + strand at 2052.962 kb on + strand at 2053.199 kb on + strand, within BWI76_RS09790 at 2053.214 kb on + strand, within BWI76_RS09790 at 2053.229 kb on + strand, within BWI76_RS09790 at 2053.264 kb on - strand, within BWI76_RS09790 at 2053.550 kb on - strand, within BWI76_RS09790 at 2053.658 kb on - strand, within BWI76_RS09790 at 2053.658 kb on - strand, within BWI76_RS09790 at 2053.959 kb on - strand, within BWI76_RS09790 at 2054.203 kb on + strand, within BWI76_RS09790 at 2054.360 kb on - strand, within BWI76_RS09790 at 2054.500 kb on + strand, within BWI76_RS09790 at 2054.560 kb on - strand, within BWI76_RS09790 at 2054.668 kb on - strand, within BWI76_RS09790 at 2054.733 kb on - strand, within BWI76_RS09790 at 2054.852 kb on - strand, within BWI76_RS09790 at 2054.858 kb on - strand, within BWI76_RS09790 at 2054.914 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 2,052,284 + -3.3 2,052,704 - -0.4 2,052,887 - +1.1 2,052,918 + +0.3 2,052,962 + -0.8 2,053,199 + BWI76_RS09790 0.16 +0.4 2,053,214 + BWI76_RS09790 0.17 +0.2 2,053,229 + BWI76_RS09790 0.18 -0.8 2,053,264 - BWI76_RS09790 0.19 +0.7 2,053,550 - BWI76_RS09790 0.32 +1.6 2,053,658 - BWI76_RS09790 0.37 +2.8 2,053,658 - BWI76_RS09790 0.37 -1.0 2,053,959 - BWI76_RS09790 0.50 -1.3 2,054,203 + BWI76_RS09790 0.61 +0.3 2,054,360 - BWI76_RS09790 0.68 +1.3 2,054,500 + BWI76_RS09790 0.74 +0.4 2,054,560 - BWI76_RS09790 0.77 +0.7 2,054,668 - BWI76_RS09790 0.81 -0.3 2,054,733 - BWI76_RS09790 0.84 -1.7 2,054,852 - BWI76_RS09790 0.89 -2.9 2,054,858 - BWI76_RS09790 0.90 +0.9 2,054,914 - +0.6
Or see this region's nucleotide sequence