Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07945 and BWI76_RS07950 are separated by 77 nucleotides BWI76_RS07950 and BWI76_RS07955 are separated by 199 nucleotides BWI76_RS07955 and BWI76_RS07960 are separated by 155 nucleotides
BWI76_RS07945: BWI76_RS07945 - alkyl hydroperoxide reductase subunit F, at 1,687,980 to 1,689,545
_RS07945
BWI76_RS07950: BWI76_RS07950 - universal stress protein G, at 1,689,623 to 1,690,051
_RS07950
BWI76_RS07955: BWI76_RS07955 - nucleoside diphosphate kinase regulator, at 1,690,251 to 1,690,661
_RS07955
BWI76_RS07960: BWI76_RS07960 - ribonuclease I, at 1,690,817 to 1,691,611
_RS07960
Position (kb)
1690
1691 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1689.555 kb on + strand at 1689.576 kb on + strand at 1689.576 kb on + strand at 1689.584 kb on - strand at 1689.596 kb on - strand at 1689.596 kb on - strand at 1689.667 kb on - strand, within BWI76_RS07950 at 1689.791 kb on - strand, within BWI76_RS07950 at 1689.882 kb on - strand, within BWI76_RS07950 at 1689.882 kb on - strand, within BWI76_RS07950 at 1689.937 kb on - strand, within BWI76_RS07950 at 1690.194 kb on - strand at 1690.363 kb on - strand, within BWI76_RS07955 at 1690.482 kb on + strand, within BWI76_RS07955 at 1691.003 kb on - strand, within BWI76_RS07960 at 1691.024 kb on - strand, within BWI76_RS07960 at 1691.291 kb on + strand, within BWI76_RS07960 at 1691.296 kb on + strand, within BWI76_RS07960 at 1691.438 kb on - strand, within BWI76_RS07960 at 1691.558 kb on + strand at 1691.625 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 1,689,555 + +0.3 1,689,576 + -2.3 1,689,576 + +1.0 1,689,584 - -1.4 1,689,596 - -0.6 1,689,596 - -1.2 1,689,667 - BWI76_RS07950 0.10 -0.7 1,689,791 - BWI76_RS07950 0.39 +0.1 1,689,882 - BWI76_RS07950 0.60 -0.7 1,689,882 - BWI76_RS07950 0.60 -0.2 1,689,937 - BWI76_RS07950 0.73 -0.4 1,690,194 - +0.2 1,690,363 - BWI76_RS07955 0.27 -1.4 1,690,482 + BWI76_RS07955 0.56 -0.3 1,691,003 - BWI76_RS07960 0.23 -0.2 1,691,024 - BWI76_RS07960 0.26 +0.7 1,691,291 + BWI76_RS07960 0.60 +0.3 1,691,296 + BWI76_RS07960 0.60 -2.7 1,691,438 - BWI76_RS07960 0.78 +0.3 1,691,558 + -0.3 1,691,625 + +2.3
Or see this region's nucleotide sequence