Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00020

Experiment: Thymine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00015 and BWI76_RS00020 are separated by 4 nucleotidesBWI76_RS00020 and BWI76_RS00025 are separated by 321 nucleotidesBWI76_RS00025 and BWI76_RS00030 are separated by 111 nucleotidesBWI76_RS00030 and BWI76_RS00035 are separated by 15 nucleotides BWI76_RS00015: BWI76_RS00015 - DNA polymerase III subunit beta, at 3,656 to 4,756 _RS00015 BWI76_RS00020: BWI76_RS00020 - chromosomal replication initiation protein DnaA, at 4,761 to 6,161 _RS00020 BWI76_RS00025: BWI76_RS00025 - hypothetical protein, at 6,483 to 6,673 _RS00025 BWI76_RS00030: BWI76_RS00030 - 50S ribosomal protein L34, at 6,785 to 6,925 _RS00030 BWI76_RS00035: BWI76_RS00035 - ribonuclease P protein component, at 6,941 to 7,300 _RS00035 Position (kb) 4 5 6 7Strain fitness (log2 ratio) -1 0 1at 6.437 kb on - strandat 6.451 kb on - strandat 6.451 kb on - strandat 6.507 kb on - strand, within BWI76_RS00025

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymine (N)
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6,437 - -0.9
6,451 - +0.4
6,451 - -0.7
6,507 - BWI76_RS00025 0.13 +0.1

Or see this region's nucleotide sequence