Experiment: 4C survival; 360 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26185 and AO353_26190 overlap by 4 nucleotides AO353_26190 and AO353_26195 are separated by 59 nucleotides AO353_26195 and AO353_26200 are separated by 3 nucleotides
AO353_26185: AO353_26185 - phage tail protein, at 5,760,162 to 5,763,419
_26185
AO353_26190: AO353_26190 - hypothetical protein, at 5,763,416 to 5,763,673
_26190
AO353_26195: AO353_26195 - hypothetical protein, at 5,763,733 to 5,764,113
_26195
AO353_26200: AO353_26200 - phage tail protein, at 5,764,117 to 5,764,770
_26200
Position (kb) 5763
5764 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5762.492 kb on + strand, within AO353_26185 at 5762.492 kb on + strand, within AO353_26185 at 5762.492 kb on + strand, within AO353_26185 at 5762.492 kb on + strand, within AO353_26185 at 5762.492 kb on + strand, within AO353_26185 at 5762.492 kb on + strand, within AO353_26185 at 5762.493 kb on - strand, within AO353_26185 at 5762.493 kb on - strand, within AO353_26185 at 5762.493 kb on - strand, within AO353_26185 at 5762.524 kb on + strand, within AO353_26185 at 5762.524 kb on + strand, within AO353_26185 at 5762.524 kb on + strand, within AO353_26185 at 5762.524 kb on + strand, within AO353_26185 at 5762.524 kb on + strand, within AO353_26185 at 5762.524 kb on + strand, within AO353_26185 at 5762.525 kb on - strand, within AO353_26185 at 5762.525 kb on - strand, within AO353_26185 at 5762.525 kb on - strand, within AO353_26185 at 5762.525 kb on - strand, within AO353_26185 at 5762.525 kb on - strand, within AO353_26185 at 5762.527 kb on + strand, within AO353_26185 at 5762.527 kb on + strand, within AO353_26185 at 5762.527 kb on + strand, within AO353_26185 at 5762.527 kb on + strand, within AO353_26185 at 5762.527 kb on + strand, within AO353_26185 at 5762.528 kb on - strand, within AO353_26185 at 5762.528 kb on - strand, within AO353_26185 at 5762.528 kb on - strand, within AO353_26185 at 5762.528 kb on - strand, within AO353_26185 at 5762.528 kb on - strand, within AO353_26185 at 5762.528 kb on - strand, within AO353_26185 at 5762.533 kb on + strand, within AO353_26185 at 5762.534 kb on - strand, within AO353_26185 at 5762.793 kb on - strand, within AO353_26185 at 5762.877 kb on - strand, within AO353_26185 at 5762.992 kb on + strand, within AO353_26185 at 5762.992 kb on + strand, within AO353_26185 at 5762.992 kb on + strand, within AO353_26185 at 5762.992 kb on + strand, within AO353_26185 at 5762.992 kb on + strand, within AO353_26185 at 5762.993 kb on - strand, within AO353_26185 at 5762.993 kb on - strand, within AO353_26185 at 5762.993 kb on - strand, within AO353_26185 at 5763.466 kb on + strand, within AO353_26190 at 5763.467 kb on - strand, within AO353_26190 at 5763.546 kb on + strand, within AO353_26190 at 5763.577 kb on + strand, within AO353_26190 at 5763.605 kb on + strand, within AO353_26190 at 5763.605 kb on + strand, within AO353_26190 at 5763.605 kb on + strand, within AO353_26190 at 5763.605 kb on + strand, within AO353_26190 at 5763.605 kb on + strand, within AO353_26190 at 5763.606 kb on - strand, within AO353_26190 at 5763.714 kb on + strand at 5763.714 kb on + strand at 5763.714 kb on + strand at 5763.714 kb on + strand at 5763.734 kb on + strand at 5763.734 kb on + strand at 5763.799 kb on - strand, within AO353_26195 at 5763.963 kb on + strand, within AO353_26195 at 5763.981 kb on + strand, within AO353_26195 at 5764.014 kb on - strand, within AO353_26195 at 5764.014 kb on - strand, within AO353_26195 at 5764.014 kb on - strand, within AO353_26195 at 5764.118 kb on + strand at 5764.118 kb on + strand at 5764.220 kb on + strand, within AO353_26200 at 5764.220 kb on + strand, within AO353_26200 at 5764.221 kb on - strand, within AO353_26200 at 5764.221 kb on - strand, within AO353_26200 at 5764.221 kb on - strand, within AO353_26200 at 5764.229 kb on + strand, within AO353_26200 at 5764.230 kb on - strand, within AO353_26200 at 5764.230 kb on - strand, within AO353_26200 at 5764.230 kb on - strand, within AO353_26200 at 5764.233 kb on + strand, within AO353_26200 at 5764.234 kb on - strand, within AO353_26200 at 5764.234 kb on - strand, within AO353_26200 at 5764.234 kb on - strand, within AO353_26200 at 5764.313 kb on + strand, within AO353_26200 at 5764.313 kb on + strand, within AO353_26200 at 5764.314 kb on - strand, within AO353_26200 at 5764.314 kb on - strand, within AO353_26200 at 5764.314 kb on - strand, within AO353_26200 at 5764.368 kb on + strand, within AO353_26200 at 5764.369 kb on - strand, within AO353_26200 at 5764.517 kb on + strand, within AO353_26200 at 5764.518 kb on - strand, within AO353_26200 at 5764.530 kb on + strand, within AO353_26200
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 360 hrs remove 5,762,492 + AO353_26185 0.72 +0.6 5,762,492 + AO353_26185 0.72 +0.3 5,762,492 + AO353_26185 0.72 -2.2 5,762,492 + AO353_26185 0.72 -1.5 5,762,492 + AO353_26185 0.72 -1.9 5,762,492 + AO353_26185 0.72 -0.5 5,762,493 - AO353_26185 0.72 +0.4 5,762,493 - AO353_26185 0.72 +0.2 5,762,493 - AO353_26185 0.72 +0.2 5,762,524 + AO353_26185 0.72 -1.2 5,762,524 + AO353_26185 0.72 -0.5 5,762,524 + AO353_26185 0.72 +1.0 5,762,524 + AO353_26185 0.72 -1.1 5,762,524 + AO353_26185 0.72 +0.4 5,762,524 + AO353_26185 0.72 +1.0 5,762,525 - AO353_26185 0.73 -1.3 5,762,525 - AO353_26185 0.73 +0.4 5,762,525 - AO353_26185 0.73 -0.1 5,762,525 - AO353_26185 0.73 -2.0 5,762,525 - AO353_26185 0.73 +2.9 5,762,527 + AO353_26185 0.73 +0.5 5,762,527 + AO353_26185 0.73 -2.7 5,762,527 + AO353_26185 0.73 +1.0 5,762,527 + AO353_26185 0.73 -0.8 5,762,527 + AO353_26185 0.73 -0.9 5,762,528 - AO353_26185 0.73 -0.5 5,762,528 - AO353_26185 0.73 +2.6 5,762,528 - AO353_26185 0.73 +0.6 5,762,528 - AO353_26185 0.73 +0.1 5,762,528 - AO353_26185 0.73 -0.4 5,762,528 - AO353_26185 0.73 -0.2 5,762,533 + AO353_26185 0.73 -1.0 5,762,534 - AO353_26185 0.73 -1.1 5,762,793 - AO353_26185 0.81 +0.7 5,762,877 - AO353_26185 0.83 -2.0 5,762,992 + AO353_26185 0.87 -0.4 5,762,992 + AO353_26185 0.87 -2.0 5,762,992 + AO353_26185 0.87 +0.0 5,762,992 + AO353_26185 0.87 +0.7 5,762,992 + AO353_26185 0.87 -0.3 5,762,993 - AO353_26185 0.87 -0.8 5,762,993 - AO353_26185 0.87 +0.1 5,762,993 - AO353_26185 0.87 +0.2 5,763,466 + AO353_26190 0.19 +0.7 5,763,467 - AO353_26190 0.20 -0.9 5,763,546 + AO353_26190 0.50 +0.5 5,763,577 + AO353_26190 0.62 -1.0 5,763,605 + AO353_26190 0.73 -0.6 5,763,605 + AO353_26190 0.73 -0.6 5,763,605 + AO353_26190 0.73 -0.5 5,763,605 + AO353_26190 0.73 -1.1 5,763,605 + AO353_26190 0.73 -1.5 5,763,606 - AO353_26190 0.74 -2.3 5,763,714 + +2.0 5,763,714 + -0.2 5,763,714 + +0.2 5,763,714 + +1.0 5,763,734 + +0.3 5,763,734 + -0.8 5,763,799 - AO353_26195 0.17 +0.9 5,763,963 + AO353_26195 0.60 +0.5 5,763,981 + AO353_26195 0.65 -0.5 5,764,014 - AO353_26195 0.74 -1.9 5,764,014 - AO353_26195 0.74 -0.3 5,764,014 - AO353_26195 0.74 -0.7 5,764,118 + -0.7 5,764,118 + +0.5 5,764,220 + AO353_26200 0.16 +0.2 5,764,220 + AO353_26200 0.16 +0.2 5,764,221 - AO353_26200 0.16 -0.9 5,764,221 - AO353_26200 0.16 -0.3 5,764,221 - AO353_26200 0.16 +0.2 5,764,229 + AO353_26200 0.17 -2.0 5,764,230 - AO353_26200 0.17 +1.2 5,764,230 - AO353_26200 0.17 +0.7 5,764,230 - AO353_26200 0.17 -1.8 5,764,233 + AO353_26200 0.18 -0.0 5,764,234 - AO353_26200 0.18 -1.2 5,764,234 - AO353_26200 0.18 +1.5 5,764,234 - AO353_26200 0.18 +0.5 5,764,313 + AO353_26200 0.30 -0.9 5,764,313 + AO353_26200 0.30 +0.5 5,764,314 - AO353_26200 0.30 +1.1 5,764,314 - AO353_26200 0.30 +0.7 5,764,314 - AO353_26200 0.30 -0.7 5,764,368 + AO353_26200 0.38 -0.5 5,764,369 - AO353_26200 0.39 +0.8 5,764,517 + AO353_26200 0.61 -1.7 5,764,518 - AO353_26200 0.61 -1.7 5,764,530 + AO353_26200 0.63 +1.3
Or see this region's nucleotide sequence