Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08185

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
1,729,114	-		BWI76_RS08180	0.64	-2.9
1,729,141	+		BWI76_RS08180	0.65	-3.6
1,729,245	+		BWI76_RS08180	0.72	-2.7
1,729,334	+		BWI76_RS08180	0.77	-3.4
1,729,334	+		BWI76_RS08180	0.77	-1.9
1,729,334	+		BWI76_RS08180	0.77	-2.7
1,729,342	-		BWI76_RS08180	0.77	-0.8
1,729,402	+		BWI76_RS08180	0.81	-3.2
1,729,594	-				-3.7
1,729,606	+				-3.5
1,729,726	+				-2.5
1,729,736	+				-4.4
1,729,756	+				-4.6
1,729,756	+				-1.7
1,729,759	-				-2.3
1,729,775	+				-3.1
1,730,033	+				-0.0
1,730,041	-				+0.1
1,730,041	-				+0.3
1,730,041	-				-0.3
1,730,058	+				-0.8
1,730,079	+				+0.2
1,730,094	-				-0.6
1,730,100	+				-0.2
1,730,109	-				-0.7
1,730,111	+				-0.2
1,730,120	+		BWI76_RS08185	0.10	+0.3
1,730,122	+		BWI76_RS08185	0.11	-0.5
1,730,130	-		BWI76_RS08185	0.12	-0.2
1,730,132	-		BWI76_RS08185	0.12	+0.0
1,730,142	-		BWI76_RS08185	0.14	-0.9
1,730,160	-				+2.0
1,730,168	+		BWI76_RS08185	0.17	-0.5
1,730,168	+		BWI76_RS08185	0.17	-0.0
1,730,176	-		BWI76_RS08185	0.18	-1.6
1,730,176	-		BWI76_RS08185	0.18	-1.2
1,730,181	+		BWI76_RS08185	0.19	-0.9
1,730,182	-		BWI76_RS08185	0.19	+2.0
1,730,184	-		BWI76_RS08185	0.20	-0.1
1,730,189	-		BWI76_RS08185	0.20	-0.8
1,730,194	-		BWI76_RS08185	0.21	-0.2
1,730,196	-		BWI76_RS08185	0.21	-0.6
1,730,196	-		BWI76_RS08185	0.21	-0.2
1,730,212	+		BWI76_RS08185	0.24	-2.2
1,730,220	-		BWI76_RS08185	0.25	+0.9
1,730,238	+		BWI76_RS08185	0.27	-2.8
1,730,238	+		BWI76_RS08185	0.27	-0.5
1,730,238	+		BWI76_RS08185	0.27	-2.5
1,730,238	+		BWI76_RS08185	0.27	+0.6
1,730,239	-		BWI76_RS08185	0.27	-1.5
1,730,239	-		BWI76_RS08185	0.27	-0.2
1,730,239	-		BWI76_RS08185	0.27	-0.8
1,730,244	-		BWI76_RS08185	0.28	+0.1
1,730,246	-		BWI76_RS08185	0.28	+0.1
1,730,246	-		BWI76_RS08185	0.28	-0.7
1,730,246	-		BWI76_RS08185	0.28	-0.8
1,730,246	-		BWI76_RS08185	0.28	+0.1
1,730,246	-		BWI76_RS08185	0.28	-0.5
1,730,246	-		BWI76_RS08185	0.28	+0.3
1,730,246	-		BWI76_RS08185	0.28	-0.0
1,730,246	-		BWI76_RS08185	0.28	+0.4
1,730,246	-		BWI76_RS08185	0.28	-0.5
1,730,251	-		BWI76_RS08185	0.29	-1.0
1,730,253	+		BWI76_RS08185	0.29	-1.0
1,730,261	-		BWI76_RS08185	0.30	-0.1
1,730,267	+		BWI76_RS08185	0.31	+0.3
1,730,268	+		BWI76_RS08185	0.31	-0.9
1,730,268	+		BWI76_RS08185	0.31	-1.0
1,730,268	+		BWI76_RS08185	0.31	+0.6
1,730,275	-		BWI76_RS08185	0.32	-0.1
1,730,276	-		BWI76_RS08185	0.33	+1.7
1,730,276	-		BWI76_RS08185	0.33	-0.1
1,730,276	-		BWI76_RS08185	0.33	+1.0
1,730,278	+		BWI76_RS08185	0.33	-1.0
1,730,278	+		BWI76_RS08185	0.33	-0.0
1,730,278	+		BWI76_RS08185	0.33	+0.5
1,730,278	+		BWI76_RS08185	0.33	+0.8
1,730,278	+		BWI76_RS08185	0.33	+0.0
1,730,278	+		BWI76_RS08185	0.33	-0.9
1,730,285	+		BWI76_RS08185	0.34	+1.5
1,730,286	-		BWI76_RS08185	0.34	-1.0
1,730,286	-		BWI76_RS08185	0.34	-0.3
1,730,286	-		BWI76_RS08185	0.34	+0.1
1,730,286	-		BWI76_RS08185	0.34	-0.7
1,730,286	-		BWI76_RS08185	0.34	-0.2
1,730,286	-		BWI76_RS08185	0.34	-0.2
1,730,286	-		BWI76_RS08185	0.34	-0.1
1,730,286	-		BWI76_RS08185	0.34	-0.4
1,730,286	-		BWI76_RS08185	0.34	-0.1
1,730,286	-		BWI76_RS08185	0.34	+0.5
1,730,286	-		BWI76_RS08185	0.34	+0.5
1,730,286	-		BWI76_RS08185	0.34	+0.3
1,730,286	-		BWI76_RS08185	0.34	+0.1
1,730,286	-		BWI76_RS08185	0.34	-0.0
1,730,286	-		BWI76_RS08185	0.34	-0.5
1,730,286	-		BWI76_RS08185	0.34	-0.1
1,730,286	-		BWI76_RS08185	0.34	-0.5
1,730,293	-		BWI76_RS08185	0.35	-0.6
1,730,314	-		BWI76_RS08185	0.38	+0.3
1,730,365	+		BWI76_RS08185	0.45	-0.0
1,730,383	-		BWI76_RS08185	0.48	-0.1
1,730,383	-		BWI76_RS08185	0.48	+0.5
1,730,383	-		BWI76_RS08185	0.48	-0.9
1,730,401	-		BWI76_RS08185	0.50	-1.5
1,730,413	-		BWI76_RS08185	0.52	-0.2
1,730,413	-		BWI76_RS08185	0.52	+0.8
1,730,413	-		BWI76_RS08185	0.52	+0.8
1,730,413	-		BWI76_RS08185	0.52	-0.7
1,730,413	-		BWI76_RS08185	0.52	-0.1
1,730,423	-		BWI76_RS08185	0.53	-0.5
1,730,548	-				-0.0
1,730,560	-		BWI76_RS08185	0.73	-1.6
1,730,576	+		BWI76_RS08185	0.75	-1.0
1,730,640	+				+0.4
1,730,646	-		BWI76_RS08185	0.85	-0.6
1,730,648	-		BWI76_RS08185	0.85	+0.1
1,730,648	-		BWI76_RS08185	0.85	+0.6
1,730,648	-		BWI76_RS08185	0.85	-1.0
1,730,648	-		BWI76_RS08185	0.85	+0.3
1,730,648	-		BWI76_RS08185	0.85	-1.0
1,730,648	-		BWI76_RS08185	0.85	+1.5
1,730,648	-		BWI76_RS08185	0.85	-1.6
1,730,648	-		BWI76_RS08185	0.85	+0.3
1,730,648	-		BWI76_RS08185	0.85	-0.4
1,730,698	-				-0.0
1,730,708	-				+0.4
1,730,709	+				-0.1
1,730,715	+				-0.8
1,730,793	+				-1.4
1,730,841	-				+0.1
1,730,866	-				-1.7
1,730,878	+				-1.4
1,730,878	+				-0.0
1,730,878	+				+0.4
1,730,886	-				-1.6
1,730,886	-				+0.5
1,730,886	-				-3.0
1,730,886	-				-1.0
1,731,005	-		BWI76_RS08190	0.13	-1.0
1,731,052	+				-0.4
1,731,052	+		BWI76_RS08190	0.16	+0.6
1,731,060	-		BWI76_RS08190	0.16	+0.6
1,731,060	-		BWI76_RS08190	0.16	+0.4
1,731,060	-		BWI76_RS08190	0.16	-0.9
1,731,067	-		BWI76_RS08190	0.17	-0.3
1,731,109	-		BWI76_RS08190	0.20	-1.4
1,731,133	+		BWI76_RS08190	0.21	+0.1
1,731,136	-		BWI76_RS08190	0.22	-0.5
1,731,136	-		BWI76_RS08190	0.22	-0.1
1,731,185	+		BWI76_RS08190	0.25	-0.2
1,731,249	-		BWI76_RS08190	0.29	-0.3
1,731,300	-		BWI76_RS08190	0.33	-0.6
1,731,368	+		BWI76_RS08190	0.37	+3.0
1,731,368	-		BWI76_RS08190	0.37	-1.0
1,731,373	+		BWI76_RS08190	0.38	-0.2
1,731,374	+		BWI76_RS08190	0.38	+0.3
1,731,375	-		BWI76_RS08190	0.38	+0.4
1,731,381	-		BWI76_RS08190	0.38	-0.0
1,731,382	-		BWI76_RS08190	0.38	+1.2
1,731,386	+		BWI76_RS08190	0.39	-0.0
1,731,386	+		BWI76_RS08190	0.39	-1.2
1,731,424	+		BWI76_RS08190	0.41	+2.2
1,731,424	+		BWI76_RS08190	0.41	-0.5
1,731,429	+		BWI76_RS08190	0.41	-0.2
1,731,429	+		BWI76_RS08190	0.41	-0.6
1,731,429	+		BWI76_RS08190	0.41	+0.9
1,731,432	-		BWI76_RS08190	0.42	+1.0
1,731,432	-		BWI76_RS08190	0.42	-1.7
1,731,432	-		BWI76_RS08190	0.42	+0.8
1,731,432	-		BWI76_RS08190	0.42	-2.4
1,731,432	-		BWI76_RS08190	0.42	-1.8
1,731,437	-		BWI76_RS08190	0.42	-0.7
1,731,439	+		BWI76_RS08190	0.42	+1.4
1,731,447	-		BWI76_RS08190	0.43	-1.8
1,731,447	-		BWI76_RS08190	0.43	-1.2
1,731,447	-		BWI76_RS08190	0.43	-1.6
1,731,451	-		BWI76_RS08190	0.43	-1.6
1,731,459	-		BWI76_RS08190	0.43	-2.1
1,731,554	+		BWI76_RS08190	0.50	-1.7
1,731,554	+		BWI76_RS08190	0.50	-2.1
1,731,598	+		BWI76_RS08190	0.53	-0.1
1,731,606	-		BWI76_RS08190	0.53	-0.8
1,731,606	-		BWI76_RS08190	0.53	-1.2
1,731,606	-		BWI76_RS08190	0.53	-0.3
1,731,631	-				-0.6
1,731,637	-		BWI76_RS08190	0.56	-0.4
1,731,638	+		BWI76_RS08190	0.56	+0.4
1,731,646	+		BWI76_RS08190	0.56	-1.6
1,731,646	+		BWI76_RS08190	0.56	-0.5
1,731,646	+		BWI76_RS08190	0.56	+0.7
1,731,646	+		BWI76_RS08190	0.56	+2.6
1,731,653	-		BWI76_RS08190	0.57	+0.2
1,731,654	-		BWI76_RS08190	0.57	+0.5
1,731,654	-		BWI76_RS08190	0.57	+0.2
1,731,694	-		BWI76_RS08190	0.59	-1.0