Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2140

Experiment: N2E2wt with N1B4m denitrifying repB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N2E2wt with N1B4m denitrifying repB
2,450,628	+		Pf1N1B4_2139	0.46	+0.3
2,450,628	+		Pf1N1B4_2139	0.46	-0.6
2,450,628	+		Pf1N1B4_2139	0.46	+0.9
2,450,628	+		Pf1N1B4_2139	0.46	-2.6
2,450,628	+		Pf1N1B4_2139	0.46	+0.9
2,450,628	+		Pf1N1B4_2139	0.46	-2.1
2,450,629	-		Pf1N1B4_2139	0.46	-0.4
2,450,629	-		Pf1N1B4_2139	0.46	+0.0
2,450,629	-		Pf1N1B4_2139	0.46	-0.7
2,450,629	-		Pf1N1B4_2139	0.46	-1.7
2,450,663	+		Pf1N1B4_2139	0.48	+0.5
2,450,663	+		Pf1N1B4_2139	0.48	-1.3
2,450,663	+		Pf1N1B4_2139	0.48	+0.9
2,450,663	+		Pf1N1B4_2139	0.48	-1.9
2,450,663	+		Pf1N1B4_2139	0.48	+0.9
2,450,663	+		Pf1N1B4_2139	0.48	+0.1
2,450,664	-		Pf1N1B4_2139	0.48	-2.5
2,450,664	-				-1.2
2,450,664	-		Pf1N1B4_2139	0.48	-0.3
2,450,664	-		Pf1N1B4_2139	0.48	+0.3
2,450,664	-		Pf1N1B4_2139	0.48	+0.2
2,450,664	-		Pf1N1B4_2139	0.48	-0.2
2,450,958	+		Pf1N1B4_2139	0.69	+0.6
2,450,958	+		Pf1N1B4_2139	0.69	-0.7
2,450,958	+		Pf1N1B4_2139	0.69	-1.2
2,450,958	+		Pf1N1B4_2139	0.69	+0.1
2,450,958	+		Pf1N1B4_2139	0.69	-0.1
2,450,958	+		Pf1N1B4_2139	0.69	-1.3
2,450,958	+		Pf1N1B4_2139	0.69	-2.3
2,450,958	+		Pf1N1B4_2139	0.69	-1.4
2,450,958	+		Pf1N1B4_2139	0.69	+0.9
2,450,958	+		Pf1N1B4_2139	0.69	-0.4
2,450,958	+		Pf1N1B4_2139	0.69	+0.9
2,450,959	-		Pf1N1B4_2139	0.69	+0.5
2,450,959	-		Pf1N1B4_2139	0.69	+0.1
2,450,959	-				+0.9
2,450,959	-		Pf1N1B4_2139	0.69	+0.9
2,450,959	-		Pf1N1B4_2139	0.69	-1.5
2,450,959	-		Pf1N1B4_2139	0.69	+1.7
2,450,959	-		Pf1N1B4_2139	0.69	+0.9
2,450,970	+		Pf1N1B4_2139	0.70	+0.9
2,450,970	+		Pf1N1B4_2139	0.70	-2.8
2,450,971	-		Pf1N1B4_2139	0.70	-1.1
2,450,971	-		Pf1N1B4_2139	0.70	-3.2
2,450,971	-		Pf1N1B4_2139	0.70	-0.3
2,450,973	+		Pf1N1B4_2139	0.70	+0.9
2,450,973	+		Pf1N1B4_2139	0.70	+0.9
2,450,973	+		Pf1N1B4_2139	0.70	-2.6
2,450,974	-		Pf1N1B4_2139	0.70	+0.9
2,450,974	-		Pf1N1B4_2139	0.70	-1.5
2,451,133	+		Pf1N1B4_2139	0.82	+0.1
2,451,133	+		Pf1N1B4_2139	0.82	+1.1
2,451,134	-		Pf1N1B4_2139	0.82	+0.2
2,451,164	+		Pf1N1B4_2139	0.84	-0.5
2,451,164	+		Pf1N1B4_2139	0.84	+0.9
2,451,164	+		Pf1N1B4_2139	0.84	-2.8
2,451,165	-		Pf1N1B4_2139	0.84	-1.7
2,451,165	-		Pf1N1B4_2139	0.84	+0.9
2,451,165	-		Pf1N1B4_2139	0.84	-2.4
2,451,165	-		Pf1N1B4_2139	0.84	-4.0
2,451,165	-		Pf1N1B4_2139	0.84	-2.1
2,451,165	-		Pf1N1B4_2139	0.84	-0.1
2,451,255	+				-2.3
2,451,336	+				+0.2
2,451,337	-				-1.7
2,451,384	+				-0.4
2,451,384	+				+0.2
2,451,384	+				+0.9
2,451,384	+				+0.9
2,451,384	+				-2.5
2,451,384	+				-1.7
2,451,385	-				-0.6
2,451,385	-				+2.0
2,451,385	-				-0.4
2,451,431	-				-1.3
2,451,447	+				-1.5
2,451,447	+				-0.6
2,451,447	+				-1.9
2,451,447	+				+0.1
2,451,448	-				+0.7
2,451,448	-				-0.1
2,451,487	+				+0.9
2,451,488	-				-0.5
2,451,488	-				-0.3
2,451,488	-				+0.9
2,451,490	+				+0.1
2,451,556	+				-0.1
2,451,556	+				-2.8
2,451,556	+				+2.4
2,451,557	-				+0.9
2,451,605	+		Pf1N1B4_2140	0.13	-0.0
2,451,605	+		Pf1N1B4_2140	0.13	+0.1
2,451,606	-		Pf1N1B4_2140	0.13	+0.4
2,451,606	-		Pf1N1B4_2140	0.13	+0.1
2,451,798	+				+0.7
2,451,799	-				-0.5
2,451,799	-				-0.4
2,451,799	-				+1.3
2,451,824	+				-1.0
2,451,824	+				-1.7
2,451,824	+				-0.1
2,451,824	+				+0.9
2,451,824	+				-1.7
2,451,824	+				-0.7
2,451,825	-				+0.9
2,451,825	-				+0.9
2,451,825	-				-0.1
2,451,825	-				+0.9
2,451,825	-				-3.4
2,451,825	-				-1.5
2,451,825	-				-1.1
2,452,153	+		Pf1N1B4_2141	0.14	+0.9
2,452,165	+				+0.9
2,452,165	+		Pf1N1B4_2141	0.15	-3.0
2,452,165	+		Pf1N1B4_2141	0.15	+0.9
2,452,166	-		Pf1N1B4_2141	0.15	-0.4
2,452,168	+		Pf1N1B4_2141	0.16	+0.9
2,452,168	+				-2.1
2,452,168	+		Pf1N1B4_2141	0.16	-0.3
2,452,168	+		Pf1N1B4_2141	0.16	-2.5
2,452,168	+		Pf1N1B4_2141	0.16	-1.4
2,452,169	-		Pf1N1B4_2141	0.16	+1.0
2,452,169	-		Pf1N1B4_2141	0.16	-0.1
2,452,169	-		Pf1N1B4_2141	0.16	+0.9
2,452,169	-		Pf1N1B4_2141	0.16	-1.7
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,170	+		Pf1N1B4_2141	0.16	-1.6
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,170	+		Pf1N1B4_2141	0.16	+0.5
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,170	+		Pf1N1B4_2141	0.16	-0.5
2,452,170	+		Pf1N1B4_2141	0.16	-2.3
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,170	+		Pf1N1B4_2141	0.16	-1.4
2,452,170	+		Pf1N1B4_2141	0.16	-0.7
2,452,170	+		Pf1N1B4_2141	0.16	-3.4
2,452,170	+		Pf1N1B4_2141	0.16	-0.7
2,452,170	+		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	-2.5
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	+0.2
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	-0.7
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	-1.1
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	+0.9
2,452,171	-		Pf1N1B4_2141	0.16	-0.4
2,452,171	-		Pf1N1B4_2141	0.16	-0.5
2,452,171	-		Pf1N1B4_2141	0.16	-0.4
2,452,171	-		Pf1N1B4_2141	0.16	-1.0
2,452,171	-		Pf1N1B4_2141	0.16	-1.7
2,452,171	-		Pf1N1B4_2141	0.16	-1.6
2,452,171	-		Pf1N1B4_2141	0.16	-0.7
2,452,246	+		Pf1N1B4_2141	0.22	+0.9
2,452,303	+		Pf1N1B4_2141	0.26	-2.3
2,452,303	+		Pf1N1B4_2141	0.26	-1.1
2,452,303	+		Pf1N1B4_2141	0.26	-3.0
2,452,303	+		Pf1N1B4_2141	0.26	+0.9
2,452,304	-		Pf1N1B4_2141	0.26	-1.1
2,452,304	-		Pf1N1B4_2141	0.26	-2.7
2,452,304	-		Pf1N1B4_2141	0.26	+0.9
2,452,337	-		Pf1N1B4_2141	0.28	+2.0
2,452,384	+		Pf1N1B4_2141	0.32	+0.9
2,452,384	+		Pf1N1B4_2141	0.32	+1.2
2,452,387	+		Pf1N1B4_2141	0.32	+1.1
2,452,387	+		Pf1N1B4_2141	0.32	+0.0
2,452,388	-		Pf1N1B4_2141	0.32	+0.9
2,452,388	-		Pf1N1B4_2141	0.32	-2.3
2,452,388	-		Pf1N1B4_2141	0.32	-0.5
2,452,388	-		Pf1N1B4_2141	0.32	+0.9
2,452,388	-		Pf1N1B4_2141	0.32	-3.3
2,452,388	-				+0.9
2,452,388	-				-1.9
2,452,480	+				+0.9
2,452,480	+		Pf1N1B4_2141	0.39	+0.9
2,452,480	+		Pf1N1B4_2141	0.39	-0.1
2,452,480	+		Pf1N1B4_2141	0.39	-0.3
2,452,480	+		Pf1N1B4_2141	0.39	+0.9
2,452,480	+		Pf1N1B4_2141	0.39	-3.2
2,452,480	+		Pf1N1B4_2141	0.39	-1.6
2,452,481	-		Pf1N1B4_2141	0.39	+0.9
2,452,481	-		Pf1N1B4_2141	0.39	-2.1
2,452,481	-		Pf1N1B4_2141	0.39	+0.9
2,452,535	-		Pf1N1B4_2141	0.44	+0.1
2,452,535	-		Pf1N1B4_2141	0.44	+0.9
2,452,535	-		Pf1N1B4_2141	0.44	+0.9
2,452,535	-		Pf1N1B4_2141	0.44	-0.7
2,452,739	-		Pf1N1B4_2141	0.59	+0.9