Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17580 and BWI76_RS17585 overlap by 4 nucleotides BWI76_RS17585 and BWI76_RS17590 are separated by 69 nucleotides BWI76_RS17590 and BWI76_RS17595 are separated by 226 nucleotides BWI76_RS17595 and BWI76_RS17600 are separated by 96 nucleotides
BWI76_RS17580: BWI76_RS17580 - MFS transporter, at 3,652,849 to 3,654,288
_RS17580
BWI76_RS17585: BWI76_RS17585 - phosphoenolpyruvate-dependent PTS family enzyme IIA component, at 3,654,285 to 3,654,719
_RS17585
BWI76_RS17590: BWI76_RS17590 - 5-hydroxyisourate hydrolase, at 3,654,789 to 3,655,199
_RS17590
BWI76_RS17595: BWI76_RS17595 - hypothetical protein, at 3,655,426 to 3,655,953
_RS17595
BWI76_RS17600: BWI76_RS17600 - hypothetical protein, at 3,656,050 to 3,656,535
_RS17600
Position (kb)
3654
3655
3656 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3653.913 kb on + strand, within BWI76_RS17580 at 3653.957 kb on + strand, within BWI76_RS17580 at 3654.041 kb on - strand, within BWI76_RS17580 at 3654.041 kb on - strand, within BWI76_RS17580 at 3654.119 kb on - strand, within BWI76_RS17580 at 3654.158 kb on - strand at 3654.224 kb on - strand at 3654.229 kb on - strand at 3654.295 kb on + strand at 3654.361 kb on - strand, within BWI76_RS17585 at 3654.372 kb on - strand, within BWI76_RS17585 at 3654.376 kb on + strand, within BWI76_RS17585 at 3654.376 kb on + strand, within BWI76_RS17585 at 3654.377 kb on - strand, within BWI76_RS17585 at 3654.451 kb on - strand, within BWI76_RS17585 at 3654.457 kb on + strand, within BWI76_RS17585 at 3654.465 kb on - strand, within BWI76_RS17585 at 3654.476 kb on + strand, within BWI76_RS17585 at 3654.476 kb on + strand, within BWI76_RS17585 at 3654.614 kb on + strand, within BWI76_RS17585 at 3654.648 kb on + strand, within BWI76_RS17585 at 3654.655 kb on + strand, within BWI76_RS17585 at 3654.656 kb on - strand, within BWI76_RS17585 at 3654.684 kb on - strand at 3654.740 kb on - strand at 3654.803 kb on - strand at 3654.816 kb on - strand at 3654.821 kb on + strand at 3654.875 kb on + strand, within BWI76_RS17590 at 3654.883 kb on - strand, within BWI76_RS17590 at 3654.915 kb on + strand, within BWI76_RS17590 at 3654.976 kb on + strand, within BWI76_RS17590 at 3654.984 kb on - strand, within BWI76_RS17590 at 3655.018 kb on + strand, within BWI76_RS17590 at 3655.018 kb on - strand, within BWI76_RS17590 at 3655.023 kb on + strand, within BWI76_RS17590 at 3655.026 kb on - strand, within BWI76_RS17590 at 3655.062 kb on + strand, within BWI76_RS17590 at 3655.076 kb on - strand, within BWI76_RS17590 at 3655.086 kb on - strand, within BWI76_RS17590 at 3655.086 kb on - strand, within BWI76_RS17590 at 3655.086 kb on - strand, within BWI76_RS17590 at 3655.086 kb on - strand, within BWI76_RS17590 at 3655.100 kb on + strand, within BWI76_RS17590 at 3655.100 kb on + strand, within BWI76_RS17590 at 3655.100 kb on + strand, within BWI76_RS17590 at 3655.100 kb on + strand, within BWI76_RS17590 at 3655.108 kb on - strand, within BWI76_RS17590 at 3655.108 kb on - strand, within BWI76_RS17590 at 3655.131 kb on - strand, within BWI76_RS17590 at 3655.131 kb on - strand, within BWI76_RS17590 at 3655.151 kb on + strand, within BWI76_RS17590 at 3655.233 kb on - strand at 3655.239 kb on + strand at 3655.239 kb on + strand at 3655.285 kb on + strand at 3655.316 kb on + strand at 3655.316 kb on + strand at 3655.324 kb on + strand at 3655.324 kb on - strand at 3655.324 kb on - strand at 3655.353 kb on + strand at 3655.353 kb on + strand at 3655.360 kb on + strand at 3655.385 kb on + strand at 3655.431 kb on + strand at 3655.431 kb on + strand at 3655.431 kb on + strand at 3655.431 kb on + strand at 3655.431 kb on + strand at 3655.431 kb on + strand at 3655.431 kb on + strand at 3655.431 kb on + strand at 3655.433 kb on - strand at 3655.439 kb on - strand at 3655.439 kb on - strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.441 kb on + strand at 3655.443 kb on + strand at 3655.446 kb on + strand at 3655.449 kb on - strand at 3655.449 kb on - strand at 3655.449 kb on - strand at 3655.449 kb on - strand at 3655.449 kb on - strand at 3655.449 kb on - strand at 3655.449 kb on - strand at 3655.463 kb on + strand at 3655.463 kb on + strand at 3655.463 kb on + strand at 3655.463 kb on + strand at 3655.471 kb on - strand at 3655.487 kb on + strand, within BWI76_RS17595 at 3655.487 kb on + strand, within BWI76_RS17595 at 3655.487 kb on + strand, within BWI76_RS17595 at 3655.487 kb on + strand, within BWI76_RS17595 at 3655.487 kb on + strand, within BWI76_RS17595 at 3655.495 kb on - strand, within BWI76_RS17595 at 3655.495 kb on - strand, within BWI76_RS17595 at 3655.495 kb on - strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.497 kb on + strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.505 kb on - strand, within BWI76_RS17595 at 3655.601 kb on + strand, within BWI76_RS17595 at 3655.724 kb on + strand, within BWI76_RS17595 at 3655.769 kb on + strand, within BWI76_RS17595 at 3655.828 kb on - strand, within BWI76_RS17595 at 3655.880 kb on + strand, within BWI76_RS17595 at 3655.880 kb on + strand, within BWI76_RS17595 at 3655.887 kb on - strand, within BWI76_RS17595 at 3655.892 kb on - strand, within BWI76_RS17595 at 3655.943 kb on + strand at 3655.951 kb on - strand at 3655.955 kb on + strand at 3656.084 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 3,653,913 + BWI76_RS17580 0.74 +0.0 3,653,957 + BWI76_RS17580 0.77 -0.5 3,654,041 - BWI76_RS17580 0.83 -0.1 3,654,041 - BWI76_RS17580 0.83 +0.4 3,654,119 - BWI76_RS17580 0.88 -0.6 3,654,158 - -0.4 3,654,224 - +0.2 3,654,229 - -0.5 3,654,295 + -0.1 3,654,361 - BWI76_RS17585 0.17 -1.2 3,654,372 - BWI76_RS17585 0.20 -1.0 3,654,376 + BWI76_RS17585 0.21 -1.0 3,654,376 + BWI76_RS17585 0.21 -0.0 3,654,377 - BWI76_RS17585 0.21 +1.6 3,654,451 - BWI76_RS17585 0.38 -0.3 3,654,457 + BWI76_RS17585 0.40 -0.6 3,654,465 - BWI76_RS17585 0.41 +0.1 3,654,476 + BWI76_RS17585 0.44 -0.4 3,654,476 + BWI76_RS17585 0.44 -0.8 3,654,614 + BWI76_RS17585 0.76 +0.0 3,654,648 + BWI76_RS17585 0.83 -0.3 3,654,655 + BWI76_RS17585 0.85 -0.1 3,654,656 - BWI76_RS17585 0.85 -0.7 3,654,684 - -1.2 3,654,740 - -1.2 3,654,803 - +1.2 3,654,816 - +0.2 3,654,821 + -0.2 3,654,875 + BWI76_RS17590 0.21 +0.6 3,654,883 - BWI76_RS17590 0.23 +0.4 3,654,915 + BWI76_RS17590 0.31 -0.1 3,654,976 + BWI76_RS17590 0.45 -0.3 3,654,984 - BWI76_RS17590 0.47 +0.0 3,655,018 + BWI76_RS17590 0.56 -0.3 3,655,018 - BWI76_RS17590 0.56 -1.5 3,655,023 + BWI76_RS17590 0.57 +0.5 3,655,026 - BWI76_RS17590 0.58 +0.1 3,655,062 + BWI76_RS17590 0.66 +1.0 3,655,076 - BWI76_RS17590 0.70 +1.4 3,655,086 - BWI76_RS17590 0.72 +0.3 3,655,086 - BWI76_RS17590 0.72 -0.4 3,655,086 - BWI76_RS17590 0.72 +0.2 3,655,086 - BWI76_RS17590 0.72 +0.3 3,655,100 + BWI76_RS17590 0.76 +0.0 3,655,100 + BWI76_RS17590 0.76 -0.2 3,655,100 + BWI76_RS17590 0.76 -0.2 3,655,100 + BWI76_RS17590 0.76 -1.0 3,655,108 - BWI76_RS17590 0.78 -0.6 3,655,108 - BWI76_RS17590 0.78 -0.8 3,655,131 - BWI76_RS17590 0.83 +0.8 3,655,131 - BWI76_RS17590 0.83 +0.1 3,655,151 + BWI76_RS17590 0.88 +0.1 3,655,233 - +0.7 3,655,239 + -0.8 3,655,239 + +0.7 3,655,285 + -0.3 3,655,316 + -0.3 3,655,316 + -0.3 3,655,324 + -1.1 3,655,324 - +0.7 3,655,324 - -0.4 3,655,353 + -0.4 3,655,353 + -0.4 3,655,360 + -0.3 3,655,385 + +0.5 3,655,431 + +0.6 3,655,431 + +1.0 3,655,431 + -0.4 3,655,431 + -0.5 3,655,431 + +0.4 3,655,431 + -0.4 3,655,431 + -0.4 3,655,431 + -0.6 3,655,433 - -0.6 3,655,439 - -0.6 3,655,439 - -0.9 3,655,441 + -1.1 3,655,441 + +0.5 3,655,441 + +1.5 3,655,441 + +0.1 3,655,441 + -0.6 3,655,441 + -0.8 3,655,441 + -0.2 3,655,441 + +0.8 3,655,441 + -0.5 3,655,441 + +0.1 3,655,441 + +0.4 3,655,441 + +0.9 3,655,441 + -0.5 3,655,441 + -0.9 3,655,441 + +0.6 3,655,441 + -0.2 3,655,441 + +0.4 3,655,441 + +0.8 3,655,441 + +2.3 3,655,441 + +0.2 3,655,441 + -1.4 3,655,441 + -0.1 3,655,441 + +0.6 3,655,441 + -0.8 3,655,441 + -0.4 3,655,443 + +0.3 3,655,446 + +0.4 3,655,449 - +1.8 3,655,449 - -1.6 3,655,449 - +0.4 3,655,449 - -0.2 3,655,449 - -0.7 3,655,449 - +0.8 3,655,449 - -0.5 3,655,463 + -1.2 3,655,463 + -0.1 3,655,463 + -2.6 3,655,463 + +0.1 3,655,471 - -0.6 3,655,487 + BWI76_RS17595 0.12 +0.3 3,655,487 + BWI76_RS17595 0.12 -0.7 3,655,487 + BWI76_RS17595 0.12 -0.4 3,655,487 + BWI76_RS17595 0.12 -0.5 3,655,487 + BWI76_RS17595 0.12 -1.6 3,655,495 - BWI76_RS17595 0.13 +1.0 3,655,495 - BWI76_RS17595 0.13 +0.7 3,655,495 - BWI76_RS17595 0.13 +1.8 3,655,497 + BWI76_RS17595 0.13 -0.6 3,655,497 + BWI76_RS17595 0.13 +0.8 3,655,497 + +2.4 3,655,497 + BWI76_RS17595 0.13 -1.4 3,655,497 + BWI76_RS17595 0.13 +1.6 3,655,497 + BWI76_RS17595 0.13 -0.6 3,655,497 + BWI76_RS17595 0.13 -0.0 3,655,497 + BWI76_RS17595 0.13 +0.4 3,655,497 + BWI76_RS17595 0.13 -0.2 3,655,497 + BWI76_RS17595 0.13 -0.0 3,655,497 + BWI76_RS17595 0.13 -0.3 3,655,497 + BWI76_RS17595 0.13 -0.1 3,655,505 - BWI76_RS17595 0.15 +0.0 3,655,505 - BWI76_RS17595 0.15 +0.5 3,655,505 - BWI76_RS17595 0.15 +0.9 3,655,505 - BWI76_RS17595 0.15 +1.2 3,655,505 - BWI76_RS17595 0.15 -0.4 3,655,505 - BWI76_RS17595 0.15 -1.6 3,655,505 - BWI76_RS17595 0.15 +0.5 3,655,505 - BWI76_RS17595 0.15 +1.6 3,655,505 - BWI76_RS17595 0.15 -0.1 3,655,505 - BWI76_RS17595 0.15 -1.9 3,655,601 + BWI76_RS17595 0.33 +0.2 3,655,724 + BWI76_RS17595 0.56 -0.1 3,655,769 + BWI76_RS17595 0.65 +1.1 3,655,828 - BWI76_RS17595 0.76 -0.1 3,655,880 + BWI76_RS17595 0.86 +0.8 3,655,880 + BWI76_RS17595 0.86 +0.5 3,655,887 - BWI76_RS17595 0.87 +0.8 3,655,892 - BWI76_RS17595 0.88 -0.6 3,655,943 + +0.1 3,655,951 - -1.0 3,655,955 + +0.9 3,656,084 - -0.9
Or see this region's nucleotide sequence