Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10590 and BWI76_RS10595 overlap by 4 nucleotides BWI76_RS10595 and BWI76_RS10600 are separated by 55 nucleotides
BWI76_RS10590: BWI76_RS10590 - class V aminotransferase, at 2,235,718 to 2,236,959
_RS10590
BWI76_RS10595: BWI76_RS10595 - allantoate amidohydrolase, at 2,236,956 to 2,238,218
_RS10595
BWI76_RS10600: BWI76_RS10600 - pectate lyase, at 2,238,274 to 2,239,983
_RS10600
Position (kb)
2236
2237
2238
2239 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2236.016 kb on + strand, within BWI76_RS10590 at 2236.465 kb on + strand, within BWI76_RS10590 at 2236.477 kb on + strand, within BWI76_RS10590 at 2236.631 kb on - strand, within BWI76_RS10590 at 2236.775 kb on + strand, within BWI76_RS10590 at 2236.775 kb on + strand at 2236.797 kb on + strand, within BWI76_RS10590 at 2236.818 kb on + strand, within BWI76_RS10590 at 2236.818 kb on + strand, within BWI76_RS10590 at 2236.873 kb on + strand at 2236.960 kb on + strand at 2237.139 kb on - strand, within BWI76_RS10595 at 2237.192 kb on - strand, within BWI76_RS10595 at 2237.402 kb on + strand, within BWI76_RS10595 at 2237.518 kb on + strand, within BWI76_RS10595 at 2237.603 kb on - strand, within BWI76_RS10595 at 2237.660 kb on + strand, within BWI76_RS10595 at 2237.826 kb on + strand, within BWI76_RS10595 at 2238.015 kb on + strand, within BWI76_RS10595 at 2238.165 kb on - strand at 2238.252 kb on - strand at 2238.290 kb on + strand at 2238.298 kb on - strand at 2238.577 kb on + strand, within BWI76_RS10600 at 2238.697 kb on + strand, within BWI76_RS10600 at 2238.896 kb on + strand, within BWI76_RS10600 at 2238.901 kb on + strand, within BWI76_RS10600 at 2238.904 kb on - strand, within BWI76_RS10600 at 2238.933 kb on + strand, within BWI76_RS10600 at 2239.140 kb on + strand, within BWI76_RS10600 at 2239.218 kb on - strand, within BWI76_RS10600
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 2,236,016 + BWI76_RS10590 0.24 -4.1 2,236,465 + BWI76_RS10590 0.60 -6.0 2,236,477 + BWI76_RS10590 0.61 -4.6 2,236,631 - BWI76_RS10590 0.74 -4.1 2,236,775 + BWI76_RS10590 0.85 -3.2 2,236,775 + +0.3 2,236,797 + BWI76_RS10590 0.87 -4.6 2,236,818 + BWI76_RS10590 0.89 -2.9 2,236,818 + BWI76_RS10590 0.89 -1.5 2,236,873 + -4.5 2,236,960 + -0.9 2,237,139 - BWI76_RS10595 0.14 -4.5 2,237,192 - BWI76_RS10595 0.19 -4.7 2,237,402 + BWI76_RS10595 0.35 -2.1 2,237,518 + BWI76_RS10595 0.44 -4.4 2,237,603 - BWI76_RS10595 0.51 -3.9 2,237,660 + BWI76_RS10595 0.56 -3.6 2,237,826 + BWI76_RS10595 0.69 -2.5 2,238,015 + BWI76_RS10595 0.84 -5.3 2,238,165 - -3.7 2,238,252 - -0.2 2,238,290 + +0.2 2,238,298 - +0.4 2,238,577 + BWI76_RS10600 0.18 -0.0 2,238,697 + BWI76_RS10600 0.25 +0.4 2,238,896 + BWI76_RS10600 0.36 +0.0 2,238,901 + BWI76_RS10600 0.37 +1.1 2,238,904 - BWI76_RS10600 0.37 -1.7 2,238,933 + BWI76_RS10600 0.39 -0.8 2,239,140 + BWI76_RS10600 0.51 -0.4 2,239,218 - BWI76_RS10600 0.55 -0.5
Or see this region's nucleotide sequence