Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10540 and BWI76_RS10545 are separated by 227 nucleotides BWI76_RS10545 and BWI76_RS10550 overlap by 1 nucleotides BWI76_RS10550 and BWI76_RS10555 overlap by 4 nucleotides BWI76_RS10555 and BWI76_RS10560 are separated by 9 nucleotides
BWI76_RS10540: BWI76_RS10540 - allantoinase, at 2,226,929 to 2,227,861
_RS10540
BWI76_RS10545: BWI76_RS10545 - hypothetical protein, at 2,228,089 to 2,228,472
_RS10545
BWI76_RS10550: BWI76_RS10550 - AtzE family amidohydrolase, at 2,228,472 to 2,229,869
_RS10550
BWI76_RS10555: BWI76_RS10555 - hypothetical protein, at 2,229,866 to 2,230,054
_RS10555
BWI76_RS10560: BWI76_RS10560 - gamma-glutamyltransferase, at 2,230,064 to 2,231,647
_RS10560
Position (kb)
2228
2229
2230 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2227.618 kb on - strand, within BWI76_RS10540 at 2227.644 kb on - strand, within BWI76_RS10540 at 2227.667 kb on - strand, within BWI76_RS10540 at 2227.754 kb on - strand, within BWI76_RS10540 at 2227.888 kb on + strand at 2227.909 kb on - strand at 2228.048 kb on + strand at 2228.077 kb on - strand at 2228.117 kb on - strand at 2228.716 kb on - strand, within BWI76_RS10550 at 2229.024 kb on + strand, within BWI76_RS10550 at 2229.082 kb on + strand, within BWI76_RS10550 at 2229.087 kb on + strand, within BWI76_RS10550 at 2229.203 kb on + strand, within BWI76_RS10550 at 2230.028 kb on - strand, within BWI76_RS10555 at 2230.180 kb on + strand at 2230.188 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 2,227,618 - BWI76_RS10540 0.74 -4.3 2,227,644 - BWI76_RS10540 0.77 -5.2 2,227,667 - BWI76_RS10540 0.79 -3.1 2,227,754 - BWI76_RS10540 0.88 -5.5 2,227,888 + -0.1 2,227,909 - -0.5 2,228,048 + +0.2 2,228,077 - -0.2 2,228,117 - -0.8 2,228,716 - BWI76_RS10550 0.17 -1.1 2,229,024 + BWI76_RS10550 0.39 -1.0 2,229,082 + BWI76_RS10550 0.44 -2.4 2,229,087 + BWI76_RS10550 0.44 -1.9 2,229,203 + BWI76_RS10550 0.52 -1.5 2,230,028 - BWI76_RS10555 0.86 -1.9 2,230,180 + -1.7 2,230,188 - -3.4
Or see this region's nucleotide sequence