Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24710

Experiment: Thymidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24705 and BWI76_RS24710 are separated by 250 nucleotidesBWI76_RS24710 and BWI76_RS24715 are separated by 254 nucleotides BWI76_RS24705: BWI76_RS24705 - oxidoreductase, at 5,151,624 to 5,152,613 _RS24705 BWI76_RS24710: BWI76_RS24710 - membrane protein, at 5,152,864 to 5,153,832 _RS24710 BWI76_RS24715: BWI76_RS24715 - serine/threonine transporter SstT, at 5,154,087 to 5,155,334 _RS24715 Position (kb) 5152 5153 5154Strain fitness (log2 ratio) -1 0 1 2at 5151.913 kb on + strand, within BWI76_RS24705at 5151.926 kb on - strand, within BWI76_RS24705at 5151.981 kb on - strand, within BWI76_RS24705at 5152.049 kb on + strand, within BWI76_RS24705at 5152.215 kb on + strand, within BWI76_RS24705at 5152.223 kb on - strand, within BWI76_RS24705at 5152.269 kb on + strand, within BWI76_RS24705at 5152.284 kb on + strand, within BWI76_RS24705at 5152.296 kb on + strand, within BWI76_RS24705at 5152.304 kb on - strand, within BWI76_RS24705at 5152.453 kb on + strand, within BWI76_RS24705at 5152.453 kb on + strand, within BWI76_RS24705at 5152.461 kb on - strand, within BWI76_RS24705at 5152.463 kb on + strand, within BWI76_RS24705at 5152.616 kb on - strandat 5152.616 kb on - strandat 5152.616 kb on - strandat 5152.917 kb on - strandat 5152.942 kb on - strandat 5152.975 kb on - strand, within BWI76_RS24710at 5153.196 kb on - strand, within BWI76_RS24710at 5153.460 kb on + strand, within BWI76_RS24710at 5153.461 kb on + strand, within BWI76_RS24710at 5153.521 kb on + strand, within BWI76_RS24710at 5153.587 kb on - strand, within BWI76_RS24710at 5153.653 kb on + strand, within BWI76_RS24710at 5153.769 kb on - strandat 5153.778 kb on + strandat 5153.778 kb on + strandat 5153.778 kb on + strandat 5153.841 kb on - strandat 5153.841 kb on - strandat 5153.855 kb on - strandat 5153.966 kb on - strandat 5153.975 kb on - strandat 5154.031 kb on - strandat 5154.063 kb on + strandat 5154.086 kb on - strandat 5154.086 kb on - strandat 5154.129 kb on + strandat 5154.137 kb on - strandat 5154.304 kb on + strand, within BWI76_RS24715at 5154.824 kb on + strand, within BWI76_RS24715

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymidine (N)
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5,151,913 + BWI76_RS24705 0.29 +0.1
5,151,926 - BWI76_RS24705 0.31 +0.0
5,151,981 - BWI76_RS24705 0.36 +0.6
5,152,049 + BWI76_RS24705 0.43 +0.2
5,152,215 + BWI76_RS24705 0.60 +0.4
5,152,223 - BWI76_RS24705 0.61 +0.9
5,152,269 + BWI76_RS24705 0.65 -0.1
5,152,284 + BWI76_RS24705 0.67 +0.7
5,152,296 + BWI76_RS24705 0.68 -0.0
5,152,304 - BWI76_RS24705 0.69 -0.1
5,152,453 + BWI76_RS24705 0.84 -1.4
5,152,453 + BWI76_RS24705 0.84 -0.1
5,152,461 - BWI76_RS24705 0.85 +0.1
5,152,463 + BWI76_RS24705 0.85 -0.1
5,152,616 - +0.4
5,152,616 - +0.9
5,152,616 - -0.3
5,152,917 - +1.9
5,152,942 - +0.1
5,152,975 - BWI76_RS24710 0.11 +0.2
5,153,196 - BWI76_RS24710 0.34 +0.1
5,153,460 + BWI76_RS24710 0.62 -0.1
5,153,461 + BWI76_RS24710 0.62 -0.2
5,153,521 + BWI76_RS24710 0.68 -0.1
5,153,587 - BWI76_RS24710 0.75 +0.0
5,153,653 + BWI76_RS24710 0.81 +0.4
5,153,769 - -0.0
5,153,778 + -0.3
5,153,778 + +0.5
5,153,778 + +0.1
5,153,841 - +0.8
5,153,841 - +0.3
5,153,855 - +0.5
5,153,966 - +0.0
5,153,975 - +0.8
5,154,031 - +0.3
5,154,063 + -0.1
5,154,086 - -0.4
5,154,086 - -0.6
5,154,129 + +0.1
5,154,137 - -0.1
5,154,304 + BWI76_RS24715 0.17 +0.6
5,154,824 + BWI76_RS24715 0.59 -0.1

Or see this region's nucleotide sequence