Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23740 and BWI76_RS23745 are separated by 392 nucleotides BWI76_RS23745 and BWI76_RS23750 are separated by 9 nucleotides BWI76_RS23750 and BWI76_RS23755 are separated by 52 nucleotides BWI76_RS23755 and BWI76_RS23760 are separated by 159 nucleotides BWI76_RS23760 and BWI76_RS23765 are separated by 80 nucleotides
BWI76_RS23740: BWI76_RS23740 - MFS transporter, at 4,956,714 to 4,958,363
_RS23740
BWI76_RS23745: BWI76_RS23745 - arsenate reductase, at 4,958,756 to 4,959,181
_RS23745
BWI76_RS23750: BWI76_RS23750 - arsenical efflux pump membrane protein ArsB, at 4,959,191 to 4,960,483
_RS23750
BWI76_RS23755: BWI76_RS23755 - transcriptional regulator, at 4,960,536 to 4,960,886
_RS23755
BWI76_RS23760: BWI76_RS23760 - tRNA-Gly, at 4,961,046 to 4,961,119
_RS23760
BWI76_RS23765: BWI76_RS23765 - peptidase M23, at 4,961,200 to 4,961,925
_RS23765
Position (kb)
4959
4960
4961 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4958.214 kb on + strand at 4958.222 kb on - strand at 4958.281 kb on - strand at 4958.422 kb on + strand at 4958.476 kb on - strand at 4958.481 kb on - strand at 4958.660 kb on + strand at 4958.734 kb on - strand at 4958.854 kb on + strand, within BWI76_RS23745 at 4958.888 kb on + strand, within BWI76_RS23745 at 4959.042 kb on + strand, within BWI76_RS23745 at 4959.240 kb on - strand at 4959.252 kb on - strand at 4959.324 kb on + strand, within BWI76_RS23750 at 4959.392 kb on + strand, within BWI76_RS23750 at 4959.572 kb on - strand, within BWI76_RS23750 at 4959.588 kb on + strand, within BWI76_RS23750 at 4959.609 kb on + strand, within BWI76_RS23750 at 4959.913 kb on + strand at 4960.078 kb on - strand at 4960.078 kb on - strand, within BWI76_RS23750 at 4960.179 kb on - strand, within BWI76_RS23750 at 4960.189 kb on - strand, within BWI76_RS23750 at 4960.243 kb on + strand, within BWI76_RS23750 at 4960.243 kb on + strand, within BWI76_RS23750 at 4960.331 kb on + strand, within BWI76_RS23750 at 4960.382 kb on - strand at 4960.415 kb on + strand at 4960.415 kb on + strand at 4960.559 kb on + strand at 4960.598 kb on + strand, within BWI76_RS23755 at 4960.687 kb on + strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.766 kb on + strand, within BWI76_RS23755 at 4960.766 kb on + strand, within BWI76_RS23755 at 4960.874 kb on - strand at 4960.927 kb on - strand at 4961.000 kb on + strand at 4961.061 kb on - strand, within BWI76_RS23760 at 4961.138 kb on + strand at 4961.372 kb on - strand, within BWI76_RS23765 at 4961.383 kb on + strand, within BWI76_RS23765
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 4,958,214 + +1.0 4,958,222 - -0.1 4,958,281 - -1.0 4,958,422 + +3.1 4,958,476 - -0.7 4,958,481 - +0.1 4,958,660 + +3.7 4,958,734 - -0.6 4,958,854 + BWI76_RS23745 0.23 +0.5 4,958,888 + BWI76_RS23745 0.31 +0.3 4,959,042 + BWI76_RS23745 0.67 +0.3 4,959,240 - -0.3 4,959,252 - +1.1 4,959,324 + BWI76_RS23750 0.10 +1.1 4,959,392 + BWI76_RS23750 0.16 +1.1 4,959,572 - BWI76_RS23750 0.29 +0.1 4,959,588 + BWI76_RS23750 0.31 +0.3 4,959,609 + BWI76_RS23750 0.32 -0.8 4,959,913 + -0.9 4,960,078 - +2.1 4,960,078 - BWI76_RS23750 0.69 +2.4 4,960,179 - BWI76_RS23750 0.76 -0.2 4,960,189 - BWI76_RS23750 0.77 +0.5 4,960,243 + BWI76_RS23750 0.81 +1.0 4,960,243 + BWI76_RS23750 0.81 +0.4 4,960,331 + BWI76_RS23750 0.88 +1.3 4,960,382 - +0.9 4,960,415 + -0.4 4,960,415 + +0.7 4,960,559 + +0.8 4,960,598 + BWI76_RS23755 0.18 -0.6 4,960,687 + BWI76_RS23755 0.43 +0.4 4,960,695 - BWI76_RS23755 0.45 +0.4 4,960,695 - BWI76_RS23755 0.45 +0.8 4,960,695 - BWI76_RS23755 0.45 -0.6 4,960,695 - BWI76_RS23755 0.45 +0.5 4,960,766 + BWI76_RS23755 0.66 +0.2 4,960,766 + BWI76_RS23755 0.66 +0.8 4,960,874 - -0.1 4,960,927 - -0.1 4,961,000 + -0.2 4,961,061 - BWI76_RS23760 0.20 -0.5 4,961,138 + -2.8 4,961,372 - BWI76_RS23765 0.24 +0.9 4,961,383 + BWI76_RS23765 0.25 +0.4
Or see this region's nucleotide sequence