Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17310 and BWI76_RS17315 are separated by 107 nucleotides BWI76_RS17315 and BWI76_RS17320 overlap by 4 nucleotides BWI76_RS17320 and BWI76_RS17325 overlap by 1 nucleotides BWI76_RS17325 and BWI76_RS17330 overlap by 4 nucleotides
BWI76_RS17310: BWI76_RS17310 - AsnC family transcriptional regulator, at 3,583,949 to 3,584,392
_RS17310
BWI76_RS17315: BWI76_RS17315 - EamA family transporter, at 3,584,500 to 3,585,395
_RS17315
BWI76_RS17320: BWI76_RS17320 - respiratory nitrate reductase subunit gamma, at 3,585,392 to 3,586,069
_RS17320
BWI76_RS17325: BWI76_RS17325 - nitrate reductase molybdenum cofactor assembly chaperone, at 3,586,069 to 3,586,779
_RS17325
BWI76_RS17330: BWI76_RS17330 - nitrate reductase subunit beta, at 3,586,776 to 3,588,311
_RS17330
Position (kb)
3585
3586
3587 Strain fitness (log2 ratio)
-1
0
1 at 3584.479 kb on - strand at 3584.626 kb on - strand, within BWI76_RS17315 at 3584.697 kb on + strand, within BWI76_RS17315 at 3584.793 kb on + strand, within BWI76_RS17315 at 3584.798 kb on + strand, within BWI76_RS17315 at 3584.801 kb on - strand, within BWI76_RS17315 at 3584.807 kb on - strand, within BWI76_RS17315 at 3585.328 kb on + strand at 3585.634 kb on + strand, within BWI76_RS17320 at 3585.852 kb on + strand, within BWI76_RS17320 at 3585.976 kb on - strand, within BWI76_RS17320 at 3586.413 kb on + strand, within BWI76_RS17325 at 3586.423 kb on + strand, within BWI76_RS17325 at 3586.513 kb on - strand, within BWI76_RS17325 at 3586.573 kb on + strand, within BWI76_RS17325 at 3586.661 kb on - strand, within BWI76_RS17325 at 3587.002 kb on + strand, within BWI76_RS17330
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 3,584,479 - -0.6 3,584,626 - BWI76_RS17315 0.14 +0.3 3,584,697 + BWI76_RS17315 0.22 +0.6 3,584,793 + BWI76_RS17315 0.33 -0.1 3,584,798 + BWI76_RS17315 0.33 -0.9 3,584,801 - BWI76_RS17315 0.34 +1.6 3,584,807 - BWI76_RS17315 0.34 +0.5 3,585,328 + -0.4 3,585,634 + BWI76_RS17320 0.36 -0.2 3,585,852 + BWI76_RS17320 0.68 -0.1 3,585,976 - BWI76_RS17320 0.86 -0.5 3,586,413 + BWI76_RS17325 0.48 -0.5 3,586,423 + BWI76_RS17325 0.50 +0.7 3,586,513 - BWI76_RS17325 0.62 -0.0 3,586,573 + BWI76_RS17325 0.71 +0.9 3,586,661 - BWI76_RS17325 0.83 -0.1 3,587,002 + BWI76_RS17330 0.15 +1.2
Or see this region's nucleotide sequence