Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16365 and BWI76_RS16370 are separated by 0 nucleotides BWI76_RS16370 and BWI76_RS16375 are separated by 10 nucleotides BWI76_RS16375 and BWI76_RS16380 are separated by 3 nucleotides
BWI76_RS16365: BWI76_RS16365 - electron transport complex subunit RsxC, at 3,394,754 to 3,396,814
_RS16365
BWI76_RS16370: BWI76_RS16370 - electron transport complex subunit D, at 3,396,815 to 3,397,867
_RS16370
BWI76_RS16375: BWI76_RS16375 - electron transport complex subunit G, at 3,397,878 to 3,398,498
_RS16375
BWI76_RS16380: BWI76_RS16380 - electron transport complex subunit RsxE, at 3,398,502 to 3,399,200
_RS16380
Position (kb)
3396
3397
3398 Strain fitness (log2 ratio)
-1
0
1
2 at 3396.157 kb on - strand, within BWI76_RS16365 at 3396.239 kb on + strand, within BWI76_RS16365 at 3396.242 kb on - strand, within BWI76_RS16365 at 3396.464 kb on + strand, within BWI76_RS16365 at 3396.730 kb on - strand at 3396.996 kb on + strand, within BWI76_RS16370 at 3396.996 kb on + strand, within BWI76_RS16370 at 3397.308 kb on + strand, within BWI76_RS16370 at 3397.364 kb on + strand, within BWI76_RS16370 at 3397.622 kb on + strand, within BWI76_RS16370 at 3397.991 kb on - strand, within BWI76_RS16375 at 3398.080 kb on + strand, within BWI76_RS16375 at 3398.406 kb on - strand, within BWI76_RS16375 at 3398.447 kb on - strand at 3398.628 kb on - strand, within BWI76_RS16380 at 3398.759 kb on + strand, within BWI76_RS16380
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 3,396,157 - BWI76_RS16365 0.68 +0.3 3,396,239 + BWI76_RS16365 0.72 +0.2 3,396,242 - BWI76_RS16365 0.72 +0.2 3,396,464 + BWI76_RS16365 0.83 -0.4 3,396,730 - +0.0 3,396,996 + BWI76_RS16370 0.17 -0.3 3,396,996 + BWI76_RS16370 0.17 +0.5 3,397,308 + BWI76_RS16370 0.47 +1.1 3,397,364 + BWI76_RS16370 0.52 +1.2 3,397,622 + BWI76_RS16370 0.77 +0.0 3,397,991 - BWI76_RS16375 0.18 +0.4 3,398,080 + BWI76_RS16375 0.33 +0.0 3,398,406 - BWI76_RS16375 0.85 +0.4 3,398,447 - +2.0 3,398,628 - BWI76_RS16380 0.18 +0.7 3,398,759 + BWI76_RS16380 0.37 -1.0
Or see this region's nucleotide sequence