Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15315 and BWI76_RS15320 are separated by 115 nucleotides BWI76_RS15320 and BWI76_RS15325 are separated by 9 nucleotides BWI76_RS15325 and BWI76_RS15330 overlap by 1 nucleotides
BWI76_RS15315: BWI76_RS15315 - DNA-binding protein, at 3,207,753 to 3,208,223
_RS15315
BWI76_RS15320: BWI76_RS15320 - ABC transporter ATP-binding protein, at 3,208,339 to 3,209,037
_RS15320
BWI76_RS15325: BWI76_RS15325 - ABC transporter ATP-binding protein, at 3,209,047 to 3,209,844
_RS15325
BWI76_RS15330: BWI76_RS15330 - urea ABC transporter permease subunit UrtC, at 3,209,844 to 3,210,917
_RS15330
Position (kb) 3209
3210 Strain fitness (log2 ratio) -1
0
1 at 3209.976 kb on + strand, within BWI76_RS15330 at 3209.976 kb on + strand, within BWI76_RS15330 at 3209.979 kb on - strand, within BWI76_RS15330 at 3210.145 kb on + strand, within BWI76_RS15330 at 3210.155 kb on + strand, within BWI76_RS15330 at 3210.155 kb on + strand at 3210.415 kb on + strand, within BWI76_RS15330
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 3,209,976 + BWI76_RS15330 0.12 -0.5 3,209,976 + BWI76_RS15330 0.12 +1.0 3,209,979 - BWI76_RS15330 0.13 -0.1 3,210,145 + BWI76_RS15330 0.28 +0.3 3,210,155 + BWI76_RS15330 0.29 -0.4 3,210,155 + +1.0 3,210,415 + BWI76_RS15330 0.53 +0.1
Or see this region's nucleotide sequence