Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_997

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,165,018	+		Pf6N2E2_995	0.40	-0.3
1,165,018	+		Pf6N2E2_995	0.40	+0.9
1,165,019	-		Pf6N2E2_995	0.40	+1.5
1,165,019	-		Pf6N2E2_995	0.40	+1.0
1,165,029	+		Pf6N2E2_995	0.42	+1.1
1,165,030	-		Pf6N2E2_995	0.42	+1.3
1,165,030	-				+1.5
1,165,140	+		Pf6N2E2_995	0.55	-0.5
1,165,140	+		Pf6N2E2_995	0.55	+1.6
1,165,140	+		Pf6N2E2_995	0.55	+0.7
1,165,140	+		Pf6N2E2_995	0.55	+1.5
1,165,140	+		Pf6N2E2_995	0.55	-1.1
1,165,140	+		Pf6N2E2_995	0.55	+2.5
1,165,220	+		Pf6N2E2_995	0.65	-0.5
1,165,220	+		Pf6N2E2_995	0.65	+0.8
1,165,220	+		Pf6N2E2_995	0.65	-1.1
1,165,255	-		Pf6N2E2_995	0.70	-1.5
1,165,255	-		Pf6N2E2_995	0.70	-0.9
1,165,444	+				-3.2
1,165,445	-				-1.7
1,165,498	+				-2.4
1,165,498	+				+1.5
1,165,705	+		Pf6N2E2_996	0.40	-0.1
1,165,872	-				-3.1
1,165,905	-				-2.4
1,165,961	+				+1.0
1,165,961	+				-2.0
1,165,961	+				-0.7
1,165,961	+				+2.5
1,165,970	+				-3.0
1,165,970	+				+0.3
1,166,006	+				+1.0
1,166,006	+				+1.5
1,166,006	+				-1.3
1,166,007	-				-1.1
1,166,009	+				-0.1
1,166,009	+				+0.5
1,166,009	+				-1.1
1,166,114	+		Pf6N2E2_997	0.20	-0.1
1,166,146	+		Pf6N2E2_997	0.24	+0.5
1,166,147	-		Pf6N2E2_997	0.24	-2.0
1,166,212	+		Pf6N2E2_997	0.33	-0.5
1,166,212	+		Pf6N2E2_997	0.33	-2.9
1,166,259	-				-0.5
1,166,285	+		Pf6N2E2_997	0.43	-0.5
1,166,285	+		Pf6N2E2_997	0.43	-0.4
1,166,285	+		Pf6N2E2_997	0.43	+1.1
1,166,285	+		Pf6N2E2_997	0.43	-0.7
1,166,286	-		Pf6N2E2_997	0.43	+1.4
1,166,286	-		Pf6N2E2_997	0.43	-2.2
1,166,289	-		Pf6N2E2_997	0.44	-1.3
1,166,311	+		Pf6N2E2_997	0.47	-1.7
1,166,312	-		Pf6N2E2_997	0.47	-1.0
1,166,330	+		Pf6N2E2_997	0.50	+0.5
1,166,330	+		Pf6N2E2_997	0.50	-0.6
1,166,330	+		Pf6N2E2_997	0.50	-2.1
1,166,331	-		Pf6N2E2_997	0.50	-4.0
1,166,360	+		Pf6N2E2_997	0.54	-2.0
1,166,361	-		Pf6N2E2_997	0.54	+2.1
1,166,361	-		Pf6N2E2_997	0.54	+2.9
1,166,644	-				+3.0
1,166,742	+				+0.5
1,166,742	+				-0.1
1,166,742	+				-0.5
1,166,743	-				-1.7
1,166,818	+				-1.9
1,166,929	-				-0.5
1,166,929	-				+1.9
1,166,929	-				+0.6
1,166,941	+				+1.4
1,166,941	+				-2.2
1,166,942	-				+1.2
1,166,942	-				+0.5
1,166,942	-				-0.7
1,166,942	-				+1.5
1,166,942	-				+1.1
1,166,942	-				+0.5
1,167,029	-				-1.9
1,167,045	-				+0.3
1,167,067	-				+0.3
1,167,188	+				+0.1
1,167,189	-				-2.1
1,167,228	+				+0.6
1,167,275	+				+0.1
1,167,423	+		Pf6N2E2_998	0.13	+1.7
1,167,424	-		Pf6N2E2_998	0.14	-0.1
1,167,426	+		Pf6N2E2_998	0.14	-1.7
1,167,474	+		Pf6N2E2_998	0.22	-0.9
1,167,494	+		Pf6N2E2_998	0.25	-2.3
1,167,494	+		Pf6N2E2_998	0.25	-1.3
1,167,494	+		Pf6N2E2_998	0.25	+0.9
1,167,495	-		Pf6N2E2_998	0.25	+0.5
1,167,495	-		Pf6N2E2_998	0.25	-2.1
1,167,495	-		Pf6N2E2_998	0.25	-0.8
1,167,495	-		Pf6N2E2_998	0.25	-1.5
1,167,526	+		Pf6N2E2_998	0.30	-2.2
1,167,546	+		Pf6N2E2_998	0.34	+2.0
1,167,546	+		Pf6N2E2_998	0.34	-3.2
1,167,563	+		Pf6N2E2_998	0.36	+2.4
1,167,563	+		Pf6N2E2_998	0.36	-0.9
1,167,564	-		Pf6N2E2_998	0.37	+3.3
1,167,569	+		Pf6N2E2_998	0.37	+2.9
1,167,668	+		Pf6N2E2_998	0.54	+1.0