Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_979

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,146,575	+		Pf6N2E2_978	0.45	-2.0
1,146,648	-		Pf6N2E2_978	0.49	-0.9
1,146,836	+		Pf6N2E2_978	0.61	+2.0
1,146,837	-		Pf6N2E2_978	0.61	-1.5
1,146,872	+		Pf6N2E2_978	0.63	+0.7
1,146,872	+		Pf6N2E2_978	0.63	-1.3
1,147,203	+		Pf6N2E2_978	0.84	+0.6
1,147,203	+		Pf6N2E2_978	0.84	-1.6
1,147,204	-		Pf6N2E2_978	0.84	+1.3
1,147,204	-		Pf6N2E2_978	0.84	-2.7
1,147,281	+		Pf6N2E2_978	0.89	-1.3
1,147,348	+				+1.9
1,147,349	-				-1.5
1,147,355	-				-0.1
1,147,355	-				+0.6
1,147,588	+		Pf6N2E2_979	0.89	-1.3
1,147,659	+				+1.1
1,147,659	+				+0.7
1,147,660	-				+1.1
1,147,660	-				-0.4
1,147,743	+				+1.5
1,147,743	+				+1.3
1,147,791	+				-0.9
1,147,791	+				-2.4
1,147,951	+		Pf6N2E2_980	0.23	+1.8
1,147,951	+		Pf6N2E2_980	0.23	-3.1
1,147,951	+		Pf6N2E2_980	0.23	+3.1
1,147,951	+		Pf6N2E2_980	0.23	+2.2
1,147,952	-		Pf6N2E2_980	0.23	-2.0
1,147,961	-		Pf6N2E2_980	0.24	-0.5
1,148,053	+		Pf6N2E2_980	0.35	+0.7
1,148,163	+		Pf6N2E2_980	0.48	+0.2
1,148,163	+		Pf6N2E2_980	0.48	+0.5
1,148,164	-		Pf6N2E2_980	0.48	-1.1
1,148,212	+		Pf6N2E2_980	0.54	-2.6
1,148,212	+		Pf6N2E2_980	0.54	+1.1
1,148,217	+		Pf6N2E2_980	0.54	+1.1
1,148,217	+		Pf6N2E2_980	0.54	-0.9
1,148,218	-		Pf6N2E2_980	0.54	+1.4
1,148,390	-		Pf6N2E2_980	0.75	-1.4
1,148,463	-		Pf6N2E2_980	0.84	-2.1
1,148,463	-		Pf6N2E2_980	0.84	+1.9
1,148,465	+		Pf6N2E2_980	0.84	-2.1
1,148,594	-				-2.5