Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_917

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,077,339	+		Pf6N2E2_916	0.57	+3.5
1,077,340	-		Pf6N2E2_916	0.57	+1.0
1,077,340	-		Pf6N2E2_916	0.57	+1.4
1,077,340	-		Pf6N2E2_916	0.57	-0.8
1,077,340	-		Pf6N2E2_916	0.57	+1.2
1,077,364	-		Pf6N2E2_916	0.58	+1.1
1,077,364	-		Pf6N2E2_916	0.58	+0.9
1,077,445	-		Pf6N2E2_916	0.63	+1.4
1,077,489	-		Pf6N2E2_916	0.66	+2.4
1,077,489	-		Pf6N2E2_916	0.66	-0.5
1,077,646	+		Pf6N2E2_916	0.77	-0.5
1,077,646	+		Pf6N2E2_916	0.77	+0.5
1,077,646	+		Pf6N2E2_916	0.77	-2.5
1,077,647	-		Pf6N2E2_916	0.77	+0.1
1,077,647	-		Pf6N2E2_916	0.77	+0.4
1,077,656	-		Pf6N2E2_916	0.77	-1.6
1,077,784	-		Pf6N2E2_916	0.86	+2.0
1,077,973	-				+0.4
1,077,984	+				-0.9
1,077,985	-				-0.8
1,078,043	+				+0.1
1,078,043	+				+1.2
1,078,137	+				-2.5
1,078,138	-				-2.3
1,078,151	+				+1.2
1,078,178	+				-2.1
1,078,221	+				+1.2
1,078,252	+				+1.0
1,078,252	+				-2.2
1,078,252	+				+1.5
1,078,255	+				+0.3
1,078,256	-				+0.1
1,078,483	+		Pf6N2E2_917	0.12	-0.8
1,078,483	+		Pf6N2E2_917	0.12	-2.3
1,078,492	+		Pf6N2E2_917	0.12	+0.4
1,078,492	+		Pf6N2E2_917	0.12	+3.1
1,078,492	+		Pf6N2E2_917	0.12	+0.1
1,078,492	+		Pf6N2E2_917	0.12	+0.9
1,078,492	+		Pf6N2E2_917	0.12	+1.2
1,078,492	+		Pf6N2E2_917	0.12	-1.8
1,078,492	+		Pf6N2E2_917	0.12	-1.6
1,078,493	-		Pf6N2E2_917	0.12	+0.9
1,078,493	-		Pf6N2E2_917	0.12	+1.7
1,078,595	-		Pf6N2E2_917	0.20	+1.4
1,078,600	+		Pf6N2E2_917	0.21	-2.1
1,078,600	+		Pf6N2E2_917	0.21	+0.6
1,078,750	-		Pf6N2E2_917	0.32	-0.9
1,078,986	+		Pf6N2E2_917	0.50	-1.3
1,078,986	+		Pf6N2E2_917	0.50	-1.3
1,078,999	-		Pf6N2E2_917	0.51	+3.0
1,079,019	-		Pf6N2E2_917	0.52	+1.1
1,079,019	-		Pf6N2E2_917	0.52	+3.2
1,079,019	-		Pf6N2E2_917	0.52	-0.1
1,079,019	-		Pf6N2E2_917	0.52	+1.7
1,079,019	-		Pf6N2E2_917	0.52	-1.1
1,079,019	-		Pf6N2E2_917	0.52	-2.4
1,079,127	+		Pf6N2E2_917	0.61	-1.8
1,079,128	-		Pf6N2E2_917	0.61	+0.9
1,079,265	+		Pf6N2E2_917	0.71	+1.1
1,079,266	-		Pf6N2E2_917	0.71	+1.1
1,079,318	+		Pf6N2E2_917	0.75	-0.9
1,079,464	-		Pf6N2E2_917	0.86	-0.4
1,079,567	+				+1.2
1,079,567	+				-1.1
1,079,567	+				-1.1
1,079,568	-				-2.2
1,079,568	-				-0.6
1,079,568	-				+2.0
1,079,774	+				-1.9
1,079,774	+				-0.6
1,079,774	+				+0.2
1,079,774	+				+0.2
1,079,774	+				+0.5
1,079,775	-				+1.4
1,079,775	-				+3.8
1,079,777	-		Pf6N2E2_918	0.10	+1.9
1,079,777	-		Pf6N2E2_918	0.10	+2.5
1,079,777	-		Pf6N2E2_918	0.10	+2.0
1,079,956	-		Pf6N2E2_918	0.36	+2.2
1,079,956	-		Pf6N2E2_918	0.36	-1.5
1,079,959	+		Pf6N2E2_918	0.37	+0.5
1,079,959	+		Pf6N2E2_918	0.37	+2.4
1,079,959	+		Pf6N2E2_918	0.37	+1.1
1,079,959	+		Pf6N2E2_918	0.37	+0.7
1,079,959	+		Pf6N2E2_918	0.37	-0.0
1,079,959	+		Pf6N2E2_918	0.37	-1.1
1,079,960	-		Pf6N2E2_918	0.37	+0.5
1,079,960	-		Pf6N2E2_918	0.37	+0.2
1,079,960	-		Pf6N2E2_918	0.37	-2.6
1,079,960	-		Pf6N2E2_918	0.37	+1.4
1,079,960	-		Pf6N2E2_918	0.37	+1.4
1,079,960	-		Pf6N2E2_918	0.37	+0.2
1,080,042	+		Pf6N2E2_918	0.49	-0.1
1,080,065	-		Pf6N2E2_918	0.53	+1.4
1,080,190	+		Pf6N2E2_918	0.71	+0.8
1,080,190	+		Pf6N2E2_918	0.71	-0.6
1,080,190	+		Pf6N2E2_918	0.71	-2.6
1,080,191	-		Pf6N2E2_918	0.71	+1.3
1,080,193	+		Pf6N2E2_918	0.71	+1.7
1,080,194	-		Pf6N2E2_918	0.72	-1.9
1,080,194	-		Pf6N2E2_918	0.72	+0.5
1,080,419	-				+0.8
1,080,419	-				-1.4