Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_878

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
1,026,092	-		Pf6N2E2_876	0.69	+1.3
1,026,095	-		Pf6N2E2_876	0.69	+0.4
1,026,095	-		Pf6N2E2_876	0.69	-2.9
1,026,109	+		Pf6N2E2_876	0.71	-1.0
1,026,110	-		Pf6N2E2_876	0.71	-0.8
1,026,110	-		Pf6N2E2_876	0.71	+0.7
1,026,110	-		Pf6N2E2_876	0.71	+1.1
1,026,269	+				+0.6
1,026,269	+				+1.7
1,026,270	-				-0.0
1,026,277	-				-0.8
1,026,286	-				-0.2
1,026,434	-		Pf6N2E2_877	0.19	-0.2
1,026,472	+		Pf6N2E2_877	0.25	+1.0
1,026,472	+		Pf6N2E2_877	0.25	-0.0
1,026,472	+		Pf6N2E2_877	0.25	-1.3
1,026,472	+		Pf6N2E2_877	0.25	+1.1
1,026,473	-		Pf6N2E2_877	0.25	+0.6
1,026,493	-		Pf6N2E2_877	0.28	+0.6
1,026,493	-		Pf6N2E2_877	0.28	+0.6
1,026,563	+		Pf6N2E2_877	0.39	-2.0
1,026,563	+		Pf6N2E2_877	0.39	+0.7
1,026,737	+		Pf6N2E2_877	0.67	-0.3
1,026,738	-		Pf6N2E2_877	0.67	+1.0
1,026,803	+		Pf6N2E2_877	0.77	-2.3
1,026,803	+		Pf6N2E2_877	0.77	-1.3
1,026,803	+		Pf6N2E2_877	0.77	-2.3
1,026,803	+		Pf6N2E2_877	0.77	-3.4
1,026,803	+		Pf6N2E2_877	0.77	+2.6
1,026,803	+		Pf6N2E2_877	0.77	+0.4
1,026,804	-		Pf6N2E2_877	0.77	-2.3
1,026,804	-		Pf6N2E2_877	0.77	+0.7
1,026,804	-		Pf6N2E2_877	0.77	-1.9
1,026,804	-		Pf6N2E2_877	0.77	+1.3
1,026,804	-		Pf6N2E2_877	0.77	+2.4
1,026,804	-		Pf6N2E2_877	0.77	+0.6
1,026,940	-				-2.0
1,026,953	+				+1.1
1,026,953	+				-1.0
1,026,954	-				+2.2
1,026,971	+				+1.7
1,026,987	+				+0.2
1,026,987	+				+0.6
1,026,988	-				-1.0
1,026,988	-				-0.9
1,026,988	-				-1.4
1,027,026	+				+0.8
1,027,027	-				-2.1
1,027,092	+				-0.2
1,027,171	+				+1.4
1,027,296	+		Pf6N2E2_878	0.18	+2.7
1,027,296	+		Pf6N2E2_878	0.18	-1.9
1,027,296	+		Pf6N2E2_878	0.18	-1.4
1,027,297	-		Pf6N2E2_878	0.18	-0.4
1,027,297	-		Pf6N2E2_878	0.18	+1.8
1,027,297	-		Pf6N2E2_878	0.18	+2.4
1,027,297	-		Pf6N2E2_878	0.18	-2.1
1,027,318	-		Pf6N2E2_878	0.19	-0.4
1,027,360	-		Pf6N2E2_878	0.22	+1.6
1,027,374	+		Pf6N2E2_878	0.23	-1.5
1,027,375	-		Pf6N2E2_878	0.23	+1.1
1,027,375	-		Pf6N2E2_878	0.23	-1.1
1,027,375	-		Pf6N2E2_878	0.23	-1.3
1,027,482	+		Pf6N2E2_878	0.30	-1.8
1,027,483	-		Pf6N2E2_878	0.30	-1.4
1,027,746	+		Pf6N2E2_878	0.48	-0.8
1,027,746	+		Pf6N2E2_878	0.48	-1.6
1,027,746	+		Pf6N2E2_878	0.48	+1.9
1,027,890	+		Pf6N2E2_878	0.57	-0.5
1,027,890	+		Pf6N2E2_878	0.57	+0.6
1,027,890	+		Pf6N2E2_878	0.57	+1.9
1,027,890	+		Pf6N2E2_878	0.57	-2.1
1,027,891	-		Pf6N2E2_878	0.57	+2.4
1,027,891	-		Pf6N2E2_878	0.57	-3.3
1,027,898	+		Pf6N2E2_878	0.58	-3.7
1,027,899	-		Pf6N2E2_878	0.58	-1.0
1,027,909	+		Pf6N2E2_878	0.58	+1.0
1,027,909	+		Pf6N2E2_878	0.58	+1.6
1,027,909	+		Pf6N2E2_878	0.58	+1.9
1,027,910	-		Pf6N2E2_878	0.58	-2.0
1,027,910	-		Pf6N2E2_878	0.58	-0.4
1,027,910	-		Pf6N2E2_878	0.58	+1.1
1,027,910	-		Pf6N2E2_878	0.58	-2.4
1,027,923	+		Pf6N2E2_878	0.59	-0.7
1,027,924	-		Pf6N2E2_878	0.59	+3.6
1,027,924	-		Pf6N2E2_878	0.59	-2.8
1,027,924	-		Pf6N2E2_878	0.59	+2.3
1,027,924	-		Pf6N2E2_878	0.59	-0.2
1,028,041	+		Pf6N2E2_878	0.67	-2.1
1,028,041	+		Pf6N2E2_878	0.67	+0.2
1,028,041	+		Pf6N2E2_878	0.67	+2.0
1,028,041	+		Pf6N2E2_878	0.67	-0.0
1,028,041	+		Pf6N2E2_878	0.67	+0.4
1,028,042	-		Pf6N2E2_878	0.67	+0.7
1,028,042	-		Pf6N2E2_878	0.67	-1.3
1,028,042	-		Pf6N2E2_878	0.67	+1.1
1,028,042	-		Pf6N2E2_878	0.67	+2.3
1,028,042	-		Pf6N2E2_878	0.67	-1.6
1,028,044	-		Pf6N2E2_878	0.67	-2.4
1,028,086	+		Pf6N2E2_878	0.70	+0.2
1,028,087	-		Pf6N2E2_878	0.70	+1.8
1,028,087	-		Pf6N2E2_878	0.70	+1.4
1,028,109	+		Pf6N2E2_878	0.72	-1.5
1,028,109	+		Pf6N2E2_878	0.72	-0.3
1,028,189	+		Pf6N2E2_878	0.77	+2.0
1,028,245	+		Pf6N2E2_878	0.81	+2.0
1,028,245	+		Pf6N2E2_878	0.81	-0.0
1,028,245	+		Pf6N2E2_878	0.81	-2.9
1,028,245	+		Pf6N2E2_878	0.81	+0.7
1,028,245	+		Pf6N2E2_878	0.81	+1.1
1,028,245	+		Pf6N2E2_878	0.81	+0.1
1,028,245	+		Pf6N2E2_878	0.81	+1.2
1,028,245	+		Pf6N2E2_878	0.81	-2.9
1,028,245	+		Pf6N2E2_878	0.81	-2.0
1,028,245	+		Pf6N2E2_878	0.81	+2.0
1,028,246	-		Pf6N2E2_878	0.81	-1.9
1,028,246	-		Pf6N2E2_878	0.81	-2.3
1,028,246	-		Pf6N2E2_878	0.81	-0.9
1,028,246	-		Pf6N2E2_878	0.81	-2.5
1,028,246	-		Pf6N2E2_878	0.81	+1.1
1,028,246	-		Pf6N2E2_878	0.81	+1.4
1,028,246	-		Pf6N2E2_878	0.81	-1.0
1,028,246	-		Pf6N2E2_878	0.81	+1.7
1,028,246	-		Pf6N2E2_878	0.81	-2.8
1,028,246	-		Pf6N2E2_878	0.81	-2.0
1,028,246	-		Pf6N2E2_878	0.81	+1.8
1,028,246	-		Pf6N2E2_878	0.81	-0.8
1,028,246	-		Pf6N2E2_878	0.81	+1.0
1,028,246	-		Pf6N2E2_878	0.81	+1.1
1,028,313	+		Pf6N2E2_878	0.85	+1.3
1,028,314	-		Pf6N2E2_878	0.85	-1.8
1,028,316	+		Pf6N2E2_878	0.85	+0.6
1,028,317	-		Pf6N2E2_878	0.85	-0.1
1,028,418	+				-1.5
1,028,452	-				+1.4
1,028,480	+				-0.9
1,028,480	+				-0.3
1,028,480	+				+0.4
1,028,480	+				+0.8
1,028,480	+				+0.3
1,028,480	+				+0.2
1,028,480	+				+1.8
1,028,481	-				-0.0
1,028,481	-				-1.9
1,028,481	-				-2.4
1,028,481	-				-0.4
1,028,654	-				-1.1
1,028,661	+				-0.7
1,028,661	+				-1.6
1,028,661	+				-0.6
1,028,662	-				-3.1
1,028,662	-				+2.6
1,028,662	-				+2.8
1,028,759	+				+1.3
1,028,760	-				+0.7
1,028,760	-				+0.9
1,028,765	+				-1.3
1,028,765	+				+1.8
1,028,765	+				+0.3
1,028,766	-				-1.9
1,028,766	-				+0.1
1,028,992	+		Pf6N2E2_879	0.41	-1.0
1,028,993	-		Pf6N2E2_879	0.41	-1.8
1,029,082	+		Pf6N2E2_879	0.58	-1.5
1,029,083	-		Pf6N2E2_879	0.58	-1.8
1,029,161	+		Pf6N2E2_879	0.73	+0.3
1,029,161	+		Pf6N2E2_879	0.73	+2.6
1,029,161	+		Pf6N2E2_879	0.73	-1.9
1,029,161	+		Pf6N2E2_879	0.73	+0.1
1,029,162	-		Pf6N2E2_879	0.73	+5.9
1,029,162	-		Pf6N2E2_879	0.73	-2.1
1,029,162	-		Pf6N2E2_879	0.73	-0.0
1,029,162	-		Pf6N2E2_879	0.73	+3.4
1,029,210	+		Pf6N2E2_879	0.82	+0.3
1,029,229	+		Pf6N2E2_879	0.86	+0.8
1,029,230	-		Pf6N2E2_879	0.86	+1.0
1,029,230	-		Pf6N2E2_879	0.86	+1.2
1,029,230	-		Pf6N2E2_879	0.86	+0.2
1,029,230	-		Pf6N2E2_879	0.86	-1.0
1,029,230	-		Pf6N2E2_879	0.86	-1.1
1,029,242	-		Pf6N2E2_879	0.88	-2.8
1,029,258	-				+0.3
1,029,259	+				-0.8
1,029,259	+				-0.1
1,029,260	-				-2.4
1,029,260	-				-0.4
1,029,260	-				-1.0
1,029,260	-				-2.1
1,029,379	-				+0.3
1,029,395	-				-0.2
1,029,411	-				+0.6
1,029,426	-				+1.0