Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5719

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
6,531,789	-		Pf6N2E2_5717	0.49	-1.3
6,531,868	+		Pf6N2E2_5717	0.68	+1.9
6,531,868	+		Pf6N2E2_5717	0.68	+0.2
6,531,869	-		Pf6N2E2_5717	0.69	+0.8
6,531,907	+		Pf6N2E2_5717	0.78	+0.9
6,531,907	+		Pf6N2E2_5717	0.78	+1.0
6,531,908	-		Pf6N2E2_5717	0.78	-1.7
6,531,908	-		Pf6N2E2_5717	0.78	+1.4
6,531,908	-		Pf6N2E2_5717	0.78	-0.1
6,531,908	-		Pf6N2E2_5717	0.78	-1.7
6,531,917	+		Pf6N2E2_5717	0.80	-1.1
6,531,918	-		Pf6N2E2_5717	0.81	+3.3
6,531,918	-		Pf6N2E2_5717	0.81	-1.2
6,531,931	-		Pf6N2E2_5717	0.84	+1.3
6,531,931	-		Pf6N2E2_5717	0.84	-2.4
6,531,931	-		Pf6N2E2_5717	0.84	+1.3
6,531,931	-		Pf6N2E2_5717	0.84	-3.5
6,532,442	+				-2.8
6,532,442	+				-0.8
6,532,443	-				-1.8
6,532,452	-				-0.8
6,532,456	+				+1.0
6,532,456	+				-0.3
6,532,456	+				+2.4
6,532,457	-				+0.3
6,532,457	-				-2.3
6,532,485	+				+1.8
6,532,741	+				-0.1
6,532,742	-				-2.4
6,532,976	+		Pf6N2E2_5719	0.21	-0.8
6,532,976	+		Pf6N2E2_5719	0.21	-0.7
6,533,237	+		Pf6N2E2_5719	0.48	-1.2
6,533,238	-		Pf6N2E2_5719	0.48	-1.3
6,533,238	-		Pf6N2E2_5719	0.48	-2.5
6,533,238	-		Pf6N2E2_5719	0.48	-1.1
6,533,384	+		Pf6N2E2_5719	0.63	-0.6
6,533,384	+		Pf6N2E2_5719	0.63	-0.3
6,533,384	+		Pf6N2E2_5719	0.63	-0.3
6,533,457	-		Pf6N2E2_5719	0.70	+1.9
6,533,520	-		Pf6N2E2_5719	0.76	-1.7
6,533,724	-				-2.1
6,533,776	+				+1.0
6,533,777	-				-3.0
6,533,832	+				-1.2
6,533,832	+				+2.9
6,533,832	+				+0.1
6,534,267	-		Pf6N2E2_5720	0.16	+0.7
6,534,526	+		Pf6N2E2_5720	0.25	-2.3
6,534,526	+		Pf6N2E2_5720	0.25	+0.1
6,534,526	+		Pf6N2E2_5720	0.25	+0.7
6,534,713	+		Pf6N2E2_5720	0.31	-1.0
6,534,714	-		Pf6N2E2_5720	0.31	-0.9
6,534,714	-		Pf6N2E2_5720	0.31	-0.6
6,534,714	-		Pf6N2E2_5720	0.31	-0.1
6,534,748	+		Pf6N2E2_5720	0.32	-0.3
6,534,748	+		Pf6N2E2_5720	0.32	-1.2
6,534,749	-		Pf6N2E2_5720	0.32	+0.4
6,534,749	-		Pf6N2E2_5720	0.32	+0.8