Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5708

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
6,523,915	+		Pf6N2E2_5707	0.51	-1.0
6,523,915	+		Pf6N2E2_5707	0.51	-0.5
6,523,915	+		Pf6N2E2_5707	0.51	+1.7
6,523,915	+		Pf6N2E2_5707	0.51	+0.6
6,523,915	+		Pf6N2E2_5707	0.51	+0.4
6,523,915	+		Pf6N2E2_5707	0.51	-1.2
6,523,915	+		Pf6N2E2_5707	0.51	-2.5
6,523,915	+		Pf6N2E2_5707	0.51	-0.0
6,523,915	+		Pf6N2E2_5707	0.51	-2.1
6,523,915	+		Pf6N2E2_5707	0.51	+1.1
6,523,915	+		Pf6N2E2_5707	0.51	+2.0
6,523,915	+		Pf6N2E2_5707	0.51	-1.1
6,523,915	+		Pf6N2E2_5707	0.51	-0.0
6,523,915	+		Pf6N2E2_5707	0.51	-0.1
6,523,915	+		Pf6N2E2_5707	0.51	+0.6
6,523,916	-		Pf6N2E2_5707	0.51	-0.3
6,523,916	-		Pf6N2E2_5707	0.51	-1.6
6,523,916	-		Pf6N2E2_5707	0.51	-0.3
6,523,916	-		Pf6N2E2_5707	0.51	-1.6
6,523,916	-		Pf6N2E2_5707	0.51	-1.1
6,523,916	-		Pf6N2E2_5707	0.51	-0.0
6,523,916	-		Pf6N2E2_5707	0.51	-2.8
6,523,916	-		Pf6N2E2_5707	0.51	-0.9
6,523,916	-		Pf6N2E2_5707	0.51	-0.6
6,523,916	-		Pf6N2E2_5707	0.51	-1.8
6,523,917	+		Pf6N2E2_5707	0.51	+0.5
6,523,918	-		Pf6N2E2_5707	0.51	+0.1
6,523,944	-		Pf6N2E2_5707	0.53	-2.5
6,523,944	-		Pf6N2E2_5707	0.53	-2.7
6,523,946	+		Pf6N2E2_5707	0.53	-0.7
6,523,946	+		Pf6N2E2_5707	0.53	-0.8
6,524,105	+		Pf6N2E2_5707	0.65	-1.4
6,524,105	+		Pf6N2E2_5707	0.65	-2.8
6,524,105	+		Pf6N2E2_5707	0.65	-0.9
6,524,148	+		Pf6N2E2_5707	0.68	-1.6
6,524,158	+		Pf6N2E2_5707	0.69	-2.1
6,524,158	+		Pf6N2E2_5707	0.69	-2.3
6,524,158	+		Pf6N2E2_5707	0.69	-0.8
6,524,159	-		Pf6N2E2_5707	0.69	+3.4
6,524,581	+				+1.1
6,524,582	-				-2.1
6,524,595	+				-1.5
6,524,595	+				-0.9
6,524,625	-				+0.8
6,524,699	-				+0.7
6,524,705	+				+1.1
6,524,705	+				-2.1
6,524,705	+				-3.2
6,524,705	+				-0.8
6,524,706	-				+0.5
6,524,706	-				+2.3
6,524,706	-				-0.3
6,524,706	-				-2.0
6,524,706	-				+3.0
6,524,706	-				+0.8
6,524,706	-				-2.4
6,524,856	+				-2.0
6,524,857	-				-2.7
6,525,152	+		Pf6N2E2_5708	0.22	+1.7
6,525,152	+		Pf6N2E2_5708	0.22	-1.9
6,525,152	+		Pf6N2E2_5708	0.22	-0.0
6,525,153	-		Pf6N2E2_5708	0.22	+0.8
6,525,153	-		Pf6N2E2_5708	0.22	+0.1
6,525,153	-		Pf6N2E2_5708	0.22	-1.8
6,525,209	+		Pf6N2E2_5708	0.27	-2.7
6,525,245	+		Pf6N2E2_5708	0.30	+0.5
6,525,245	+		Pf6N2E2_5708	0.30	+1.1
6,525,245	+		Pf6N2E2_5708	0.30	+1.0
6,525,245	+		Pf6N2E2_5708	0.30	-1.3
6,525,245	+		Pf6N2E2_5708	0.30	+2.6
6,525,246	-		Pf6N2E2_5708	0.30	-1.3
6,525,311	+		Pf6N2E2_5708	0.36	-2.8
6,525,311	+		Pf6N2E2_5708	0.36	+0.7
6,525,312	-		Pf6N2E2_5708	0.36	+0.4
6,525,312	-		Pf6N2E2_5708	0.36	-0.2
6,525,590	+		Pf6N2E2_5708	0.59	+0.7
6,525,590	+		Pf6N2E2_5708	0.59	-0.0
6,525,590	+		Pf6N2E2_5708	0.59	-2.8
6,525,590	+		Pf6N2E2_5708	0.59	+0.8
6,525,590	+		Pf6N2E2_5708	0.59	+0.3
6,525,591	-		Pf6N2E2_5708	0.59	-0.3
6,525,591	-		Pf6N2E2_5708	0.59	+1.4
6,525,591	-		Pf6N2E2_5708	0.59	+1.7
6,525,591	-		Pf6N2E2_5708	0.59	-1.0
6,525,596	+		Pf6N2E2_5708	0.60	-1.3
6,525,597	-		Pf6N2E2_5708	0.60	-0.6
6,525,597	-		Pf6N2E2_5708	0.60	-0.3
6,525,597	-		Pf6N2E2_5708	0.60	+1.0
6,525,597	-		Pf6N2E2_5708	0.60	-2.3
6,525,597	-		Pf6N2E2_5708	0.60	-2.3
6,525,597	-		Pf6N2E2_5708	0.60	-1.1
6,525,599	+		Pf6N2E2_5708	0.60	+0.9
6,525,599	+		Pf6N2E2_5708	0.60	+1.5
6,525,599	+		Pf6N2E2_5708	0.60	-1.5
6,525,600	-		Pf6N2E2_5708	0.60	-1.6
6,525,600	-		Pf6N2E2_5708	0.60	+2.5
6,525,604	+		Pf6N2E2_5708	0.61	-1.3
6,525,736	+		Pf6N2E2_5708	0.72	-1.7
6,525,736	+		Pf6N2E2_5708	0.72	+0.3
6,525,737	-		Pf6N2E2_5708	0.72	-0.3
6,525,737	-		Pf6N2E2_5708	0.72	-2.0
6,525,737	-		Pf6N2E2_5708	0.72	-1.9
6,525,861	+		Pf6N2E2_5708	0.82	-0.6
6,525,861	+		Pf6N2E2_5708	0.82	-2.2
6,525,862	-		Pf6N2E2_5708	0.82	-1.9
6,525,967	+				+0.4
6,526,021	+				-0.0
6,526,022	-				+0.8
6,526,022	-				-2.6
6,526,067	+				+1.7
6,526,067	+				-2.1
6,526,068	-				+1.9
6,526,068	-				-2.7
6,526,120	+				+1.5
6,526,120	+				+0.3
6,526,121	-				-0.2
6,526,154	+				-0.6
6,526,154	+				+0.7
6,526,154	+				+0.6
6,526,155	-				-1.0
6,526,155	-				+1.6
6,526,155	-				-1.3
6,526,155	-				+1.2
6,526,177	+		Pf6N2E2_5709	0.12	+2.4
6,526,177	+		Pf6N2E2_5709	0.12	-1.8
6,526,252	+		Pf6N2E2_5709	0.27	+1.0
6,526,252	+		Pf6N2E2_5709	0.27	+0.4
6,526,252	+		Pf6N2E2_5709	0.27	-0.3
6,526,252	+		Pf6N2E2_5709	0.27	+2.8
6,526,252	+		Pf6N2E2_5709	0.27	+2.2
6,526,252	+		Pf6N2E2_5709	0.27	+1.2
6,526,253	-		Pf6N2E2_5709	0.27	-1.6
6,526,253	-		Pf6N2E2_5709	0.27	-0.8
6,526,253	-		Pf6N2E2_5709	0.27	+0.8
6,526,253	-		Pf6N2E2_5709	0.27	-1.0
6,526,259	-		Pf6N2E2_5709	0.28	-0.6
6,526,311	+		Pf6N2E2_5709	0.39	-1.7
6,526,311	+		Pf6N2E2_5709	0.39	-0.8
6,526,312	-		Pf6N2E2_5709	0.39	-1.8
6,526,318	+		Pf6N2E2_5709	0.40	+2.0
6,526,319	-		Pf6N2E2_5709	0.40	-2.9
6,526,319	-		Pf6N2E2_5709	0.40	-2.2
6,526,576	+				-0.3
6,526,641	-				-0.7
6,526,762	+				+2.0
6,526,763	-				+0.7
6,526,763	-				+0.5
6,526,794	+				-0.0
6,526,796	+				-2.5
6,526,796	+				+2.0
6,526,797	-				+0.2
6,526,797	-				+0.9
6,526,940	+		Pf6N2E2_5710	0.26	+0.5
6,526,940	+		Pf6N2E2_5710	0.26	-1.1
6,526,940	+		Pf6N2E2_5710	0.26	+2.1
6,526,940	+		Pf6N2E2_5710	0.26	+1.3
6,526,940	+		Pf6N2E2_5710	0.26	-2.1
6,526,940	+		Pf6N2E2_5710	0.26	+0.9
6,526,941	-		Pf6N2E2_5710	0.26	+0.9
6,526,941	-		Pf6N2E2_5710	0.26	+0.1
6,526,941	-		Pf6N2E2_5710	0.26	+2.0
6,526,941	-		Pf6N2E2_5710	0.26	+1.8
6,526,941	-		Pf6N2E2_5710	0.26	+1.0
6,526,941	-		Pf6N2E2_5710	0.26	-0.5
6,526,941	-		Pf6N2E2_5710	0.26	+0.3
6,526,941	-		Pf6N2E2_5710	0.26	-1.3
6,526,941	-		Pf6N2E2_5710	0.26	+2.2
6,526,949	+		Pf6N2E2_5710	0.27	+0.8
6,526,949	+		Pf6N2E2_5710	0.27	+1.2
6,526,950	-		Pf6N2E2_5710	0.27	-3.6
6,526,950	-		Pf6N2E2_5710	0.27	+0.7
6,526,950	-		Pf6N2E2_5710	0.27	-0.1
6,526,959	-		Pf6N2E2_5710	0.29	+2.0
6,527,048	+		Pf6N2E2_5710	0.43	-1.6
6,527,048	+				+3.3
6,527,048	+		Pf6N2E2_5710	0.43	-1.8
6,527,049	-		Pf6N2E2_5710	0.44	+1.8
6,527,049	-		Pf6N2E2_5710	0.44	+1.2
6,527,049	-		Pf6N2E2_5710	0.44	+1.0