Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5689

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
6,502,841	+				-1.3
6,502,909	+				-0.8
6,502,942	-				-1.5
6,502,942	-				-0.2
6,502,942	-				-1.7
6,502,994	+		Pf6N2E2_5688	0.13	-0.2
6,502,994	+		Pf6N2E2_5688	0.13	+1.7
6,502,995	-		Pf6N2E2_5688	0.13	+1.2
6,502,995	-		Pf6N2E2_5688	0.13	-2.2
6,503,097	+		Pf6N2E2_5688	0.27	+1.6
6,503,097	+		Pf6N2E2_5688	0.27	-2.9
6,503,097	+		Pf6N2E2_5688	0.27	+1.0
6,503,098	-		Pf6N2E2_5688	0.27	-1.5
6,503,186	+		Pf6N2E2_5688	0.39	-0.8
6,503,186	+		Pf6N2E2_5688	0.39	-2.2
6,503,186	+		Pf6N2E2_5688	0.39	-0.8
6,503,186	+		Pf6N2E2_5688	0.39	-2.5
6,503,187	-		Pf6N2E2_5688	0.39	+1.4
6,503,187	-		Pf6N2E2_5688	0.39	+1.7
6,503,226	-		Pf6N2E2_5688	0.44	-3.0
6,503,226	-		Pf6N2E2_5688	0.44	+1.6
6,503,278	-		Pf6N2E2_5688	0.51	+2.2
6,503,307	+		Pf6N2E2_5688	0.55	-2.0
6,503,490	+		Pf6N2E2_5688	0.80	-0.8
6,503,490	+		Pf6N2E2_5688	0.80	-0.6
6,503,491	-		Pf6N2E2_5688	0.80	-1.0
6,503,491	-		Pf6N2E2_5688	0.80	+0.0
6,503,491	-		Pf6N2E2_5688	0.80	-0.6
6,503,509	+		Pf6N2E2_5688	0.82	-2.5
6,503,509	+		Pf6N2E2_5688	0.82	-0.6
6,503,510	-		Pf6N2E2_5688	0.82	+1.6
6,503,665	+				+0.6
6,503,665	+				-2.4
6,503,665	+				+1.1
6,503,665	+				+2.0
6,503,666	-				+0.5
6,503,666	-				-2.0
6,503,666	-				+0.4
6,503,666	-				-2.0
6,503,666	-				+2.5
6,503,666	-				-1.2
6,503,700	-				-0.3
6,503,700	-				-0.5
6,503,712	+				-2.1
6,503,712	+				-0.9
6,503,712	+				-0.3
6,503,793	-		Pf6N2E2_5689	0.13	-1.3
6,503,917	+		Pf6N2E2_5689	0.39	-0.3
6,503,918	-		Pf6N2E2_5689	0.39	-0.7
6,503,918	-		Pf6N2E2_5689	0.39	-1.0
6,504,078	+		Pf6N2E2_5689	0.74	+0.6
6,504,079	-		Pf6N2E2_5689	0.74	-1.5
6,504,142	+		Pf6N2E2_5689	0.87	+0.3
6,504,184	+				-1.2
6,504,184	+				+0.0
6,504,184	+				+2.0
6,504,184	+				-0.9
6,504,219	-				-1.5
6,504,585	-				-1.7
6,504,638	+				+1.4
6,504,639	-				-1.2
6,504,678	-				+0.2
6,504,678	-				+0.0
6,504,689	+				-0.1
6,504,690	-				-2.2
6,504,720	+				-1.7
6,504,721	-				-0.8
6,504,721	-				-0.3
6,504,721	-				-0.8
6,504,721	-				+3.3
6,504,721	-				+0.1
6,504,740	+				+0.9
6,504,740	+				-1.0
6,504,740	+				-2.6
6,504,740	+				-1.3
6,504,741	-				-0.9
6,504,741	-				+0.8
6,504,741	-				-1.0
6,504,741	-				+1.0
6,504,741	-				-0.3
6,504,741	-				+2.0
6,504,741	-				+1.0
6,504,817	+		Pf6N2E2_5691	0.10	-2.0
6,504,817	+		Pf6N2E2_5691	0.10	-0.7
6,504,818	-		Pf6N2E2_5691	0.10	+0.8