Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5685

Experiment: deoxycholate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	deoxycholate 0.0125 M
6,498,301	+		Pf6N2E2_5684	0.44	+1.9
6,498,302	-		Pf6N2E2_5684	0.44	+3.2
6,498,302	-		Pf6N2E2_5684	0.44	-0.2
6,498,443	-		Pf6N2E2_5684	0.52	-2.1
6,498,791	+		Pf6N2E2_5684	0.74	+1.2
6,498,791	+		Pf6N2E2_5684	0.74	+0.3
6,498,792	-		Pf6N2E2_5684	0.74	+0.9
6,498,850	+		Pf6N2E2_5684	0.78	+0.9
6,498,850	+		Pf6N2E2_5684	0.78	+1.9
6,498,961	+		Pf6N2E2_5684	0.85	+1.3
6,498,961	+		Pf6N2E2_5684	0.85	-2.3
6,499,035	+		Pf6N2E2_5684	0.89	+0.6
6,499,035	+		Pf6N2E2_5684	0.89	-0.1
6,499,036	-		Pf6N2E2_5684	0.89	+1.6
6,499,036	-		Pf6N2E2_5684	0.89	+1.2
6,499,294	+		Pf6N2E2_5685	0.14	+0.2
6,499,294	+		Pf6N2E2_5685	0.14	+0.6
6,499,294	+		Pf6N2E2_5685	0.14	-3.7
6,499,295	-		Pf6N2E2_5685	0.14	-0.3
6,499,406	+		Pf6N2E2_5685	0.30	+1.9
6,499,406	+		Pf6N2E2_5685	0.30	+2.5
6,499,406	+		Pf6N2E2_5685	0.30	+0.5
6,499,407	-		Pf6N2E2_5685	0.30	+0.4
6,499,446	-		Pf6N2E2_5685	0.36	-0.8
6,499,526	+		Pf6N2E2_5685	0.47	-2.4
6,499,526	+		Pf6N2E2_5685	0.47	+1.7
6,499,526	+		Pf6N2E2_5685	0.47	-2.0
6,499,526	+		Pf6N2E2_5685	0.47	+2.5
6,499,526	+		Pf6N2E2_5685	0.47	+0.1
6,499,526	+		Pf6N2E2_5685	0.47	-1.0
6,499,527	-		Pf6N2E2_5685	0.47	+0.8
6,499,527	-		Pf6N2E2_5685	0.47	+1.2
6,499,527	-		Pf6N2E2_5685	0.47	-1.6
6,499,527	-		Pf6N2E2_5685	0.47	+0.1
6,499,527	-		Pf6N2E2_5685	0.47	+1.3
6,499,527	-		Pf6N2E2_5685	0.47	+1.4
6,499,604	-		Pf6N2E2_5685	0.58	+2.9
6,499,604	-		Pf6N2E2_5685	0.58	-2.6
6,499,604	-		Pf6N2E2_5685	0.58	+1.0
6,499,730	+		Pf6N2E2_5685	0.77	+0.6
6,499,778	+		Pf6N2E2_5685	0.84	+1.5
6,499,778	+		Pf6N2E2_5685	0.84	+0.7
6,499,778	+		Pf6N2E2_5685	0.84	-2.0
6,499,778	+		Pf6N2E2_5685	0.84	-2.2
6,499,779	-		Pf6N2E2_5685	0.84	+0.9
6,499,779	-		Pf6N2E2_5685	0.84	-1.6
6,499,880	+				-2.3
6,499,880	+				-0.8
6,499,880	+				+1.1
6,499,880	+				+1.3
6,499,881	-				-2.0
6,499,881	-				-0.1
6,499,881	-				+1.0
6,499,903	+				+0.8
6,499,907	+				+1.1
6,499,907	+				+0.4
6,499,907	+				-1.3
6,499,907	+				+0.7
6,499,907	+				+1.7
6,499,907	+				-1.2
6,499,961	+				+2.0
6,499,961	+				+1.3
6,499,961	+				+1.9
6,499,961	+				-2.0
6,499,961	+				+2.1
6,499,961	+				+2.0
6,499,962	-				-1.8
6,499,962	-				-2.1
6,499,982	-				-1.2
6,499,982	-				-0.8
6,500,001	+				+1.6
6,500,001	+				+1.1
6,500,001	+				-2.6
6,500,002	-				+1.0
6,500,002	-				-1.0
6,500,035	+				+0.0
6,500,035	+				+0.0
6,500,035	+				-1.2
6,500,035	+				-1.8
6,500,035	+				+1.1
6,500,035	+				-0.7
6,500,035	+				-3.3
6,500,035	+				+2.9
6,500,035	+				-1.3
6,500,035	+				+2.1
6,500,036	-				+1.7
6,500,036	-				+0.1
6,500,036	-				-3.1
6,500,036	-				+0.4
6,500,036	-				+1.1
6,500,151	+				+0.6
6,500,152	-				+0.4
6,500,418	-		Pf6N2E2_5686	0.27	-1.7
6,500,418	-		Pf6N2E2_5686	0.27	-0.1
6,500,600	+		Pf6N2E2_5686	0.41	+2.0
6,500,600	+		Pf6N2E2_5686	0.41	+2.0
6,500,600	+		Pf6N2E2_5686	0.41	+0.4
6,500,600	+		Pf6N2E2_5686	0.41	-0.6
6,500,600	+		Pf6N2E2_5686	0.41	-0.2
6,500,600	+		Pf6N2E2_5686	0.41	-0.6
6,500,600	+		Pf6N2E2_5686	0.41	+2.4
6,500,601	-		Pf6N2E2_5686	0.41	+0.1
6,500,601	-		Pf6N2E2_5686	0.41	+1.3
6,500,635	+		Pf6N2E2_5686	0.43	+0.1
6,500,635	+		Pf6N2E2_5686	0.43	+0.8
6,500,659	-		Pf6N2E2_5686	0.45	+0.1
6,500,659	-		Pf6N2E2_5686	0.45	+0.8
6,500,854	+		Pf6N2E2_5686	0.60	+1.3